Publications 2020

Schreler, J. E., R.A. Lutz. 2019.  Hydrothermal Vent Biota. Vol. 4. pp. 308-319.  In: Encyclopedia of Ocean Sciences, Cochran, J. K., Bokuniewicz, H., Yager, P. Eds.,  Elsevier, Ltd. 4330 p.

Joshua A. Mancini, Douglas H. Pike, Alexei M. Tyryshkin, Liti Haramaty, Michael S. Wang, Saroj Poudel, Michael Hecht, Vikas Nanda. Design of a Fe4S4 cluster into the core of a de novo four-helix bundle.July/August 2020: 574-585. DOI: 10.1002/bab.2003

López, A. G., J. L. Wilkin and J. C. Levin, (2020) Doppio – a ROMS (v3.6)-based circulation model for the Mid-Atlantic Bight and Gulf of Maine: configuration and comparison to integrated coastal observing network observations, Geosci. Model Dev., 13, 3709–3729, DOI: 10.5194/gmd-13-3709-2020

Katrina A. Catalano, Allison G. Dedrick, Michelle R. Stuart, Jonathan B. Puritz, Humberto R. Montes Jr., Malin L. Pinsky. (2020) Quantifying dispersal variability among nearshore marine populations. Molecular Ecology. DOI: 10.1111/mec.15732

Saroj Poudel, Douglas H. Pike, Hagai Raanan, Joshua A. Mancini, Vikas Nanda, Rosalind E. M. Rickaby, and Paul G. Falkowski. (2020) Biophysical analysis of the structural evolution of substrate specificity in RuBisCO. PNAS. DOI: 10.1073/pnas.2018939117

Roarty, H., Glenn, S., Brodie, J., Nazzaro, L., Smith, M., Handel, E., Josh Kohut, Teresa Updyke, Larry Atkinson, William Boicourt, Wendell Brown, Harvey Seim, Mike Muglia, Haixing Wang, and Donglai Gong. (2020). Annual and seasonal surface circulation over the MidAtlantic Bight Continental Shelf derived from a decade of High Frequency Radar observations. Journal of Geophysical Research: Oceans, 125, e2020JC016368. DOI: 10.1029/2020JC016368

Wright‐Fairbanks, E. K., Miles, T. N., Cai, W.‐J., Chen, B., & Saba, G. K.(2020). Autonomous observation of seasonal carbonate chemistry dynamics in the Mid‐Atlantic Bight. Journal of Geophysical Research: Oceans, 125, e2020JC016505. DOI: 10.1029/2020JC016505

Levin, J., H. G. Arango, B. Laughlin, J. Wilkin and A. M. Moore, (2019), The Impact of Remote Sensing Observations on Cross-Shelf Transport Estimates from 4D-Var Analyses of the Mid-Atlantic Bight, Advances in Space Research DOI: 10.1016/j.asr.2019.09.012

Levin, J., H. Arango, B. Laughlin, E. Hunter, J. Wilkin and A. Moore, (2020), Observation impacts on the Mid-Atlantic Bight front and cross-shelf transport in 4D-Var ocean state estimates, Part I – Multiplatform Analysis, Ocean Modelling, 156, 101721 DOI: 10.1016/j.ocemod.2020.101721

Baker, R., M. D. Taylor, K. W. Able, et al. 2020. Fisheries rely on threatened salt marshes.  Science 370: 670-671

Pousse, E., Poach, M.E., Redman, D.H., Sennefelder, G., White, L.E., Lindsay, J.M., Munroe, D., Hard, D., Hennen, D., Dixon, M.S., Li, Y., Wikfors, G.H., Meseck, S.L. Energetic response of Atlantic surfclam, Spisula solidissima, to ocean acidification. Marine Pollution Bulletin. 161B: 111740. DOI: 10.1016/j.marpolbul.2020.111740

Morley, J., T. Frölicher; and M. L. Pinsky. 2020. Characterizing uncertainty in climate impact projections: a case study with seven marine ICES Journal of Marine Science, fsaa103. https://doi.org/10.1093/icesjms/fsaa103

Maureaud, A., Frelat, R., Pécuchet, L., Shackell, N., Mérigot, B., Pinsky, M. L., Amador, K., Anderson, S. C., Arkhipkin, A., Auber, A., Barri, I., Bell, R., Belmaker, J., Beukhof, E., Camara, M. L., Guevara-Carrasco, R., Choi, J., Christensen, H.T., Conner, J., Cubillos, L. A., Diadhiou, H. D., Edelist, D., Emblemsvåg, M., Ernst, B., Fairweather, T. P., Fock, H. O., Friedland, K. D., Garcia, C. B., Gascuel, D., Gislason, H., Goren, M., Guitton, J., Jouffre, D., Hattab, T., Hidalgo, M., Kathena, J. N., Knuckey, I., Kidé, S. O., Koen-Alonso, M., Koopman, M., Kulik, V., León, J.P. , Levitt-Barmats, Y., Lindegren, M., Llope, M., Massiot-Granier, F., Masski, H., McLean, M., Meissa, B., Mérillet, L., Mihneva, V., Nunoo, F. K. E., O’Driscoll, R., O’Leary, C. A., Petrova, E., Ramos, J. E., Refes, W., Román-Marcote, E., Siegstad, H., Sobrino, I., Sólmundsson, J., Sonin, O., Spies, I., Steingrund, P., Stephenson, F., Stern, N., Tserkova, F., Tserpes, G., Tzanatos, E., van Rijn, I., van Zwieten, P. A. M., Vasilakopoulos, P., Yepsen, D. V., Ziegler, P., and J. Thorson. 2020. Are we ready to track climate-driven shifts in marine species across international boundaries? – A global survey of scientific bottom trawl data. bioRxiv. https://doi.org/10.1101/2020.06.18.125930

Fredston‐Hermann, A., R. Selden, M. Pinsky, S. D. Gaines, B. S. Halpern. 2020. Cold range edges of marine fishes track climate change better than warm edges Global Change Biology 26(5): 2908-2922. https://doi.org/10.1111/gcb.15035

Haowen Dang, Zhimin Jian, Yue Wang1, Mahyar Mohtadi2, Yair Rosenthal, Liming Ye, Franck Bassinot, Wolfgang Kuhnt. 2020. Pacific warm pool subsurface heat sequestration modulated Walker circulation and ENSO activity during the Holocene. Science Advance.

Ben Knowles, Juan A. Bonachela, Michael J. Behrenfeld, Karen G. Bondoc, B. B. Cael, Craig A. Carlson, Nick Cieslik, Ben Diaz, Heidi L. Fuchs, Jason R. Graff, Juris A. Grasis, Kimberly H. Halsey, Liti Haramaty, Christopher T. Johns, Frank Natale, Jozef I. Nissimov, Brittany Schieler, Kimberlee Thamatrakoln, T. Frede Thingstad, Selina Våge, Cliff Watkins, Toby K. Westberry & Kay D. Bidle. 2020. Temperate infection in a virus–host system previously known for virulent dynamics. Nature Communications. DOI: 10.1038/s41467-020-18078-4

Clifford Watkins, Daniel B. Whitt. Large-aspect-ratio structures in simulated ocean surface boundary layer turbulence under a hurricane. 2020. J. Phys. Oceanogr. 1–70.
DOI: 10.1175/JPO-D-20-0134.1

Mike Eichhorn, David Aragon, Yuri A.W. Shardt, Hugh Roarty. 2020. Modeling for the performance of navigation, control and data postprocessin of underwater gliders. Applied Ocean Research 101.

K. W. Able, T. M. Grothues, M. J. Shaw, S. M. VanMorter, M. C. Sullivan, D. D. Ambrose. 2020. Alewife (Alosa pseudoharengus) spawning and nursery areas in a sentinel estuary: spatial and temporal patterns. Environ Biol Fish. DOI: 10.1007/s10641-020-01032-0

Yi Xu, Travis Miles, Oscar Schofield. 2020. Physical processes controlling chlorophyll-a variability on the Mid-Atlantic Bight along northeast United States. Journal of Marine Systems Volume 2012. DOI: 10.1016/j.jmarsys.2020.103433

Krause J. R., J. E. Hightower, J. A. Buckel, J. T. Turnure, T. Grothues, J. Manderson, J. Rosendale, and J. Pessutti. 2020. Using acoustic telemetry to estimate weakfish survival rates along the U.S. East Coast. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science. 12:241-257. DOI: 10.1002/mcf2.10095

Fuchs, H. L., R. J. Chant, E. J. Hunter, E. A. Curchitser, G. P. Gerbi and E. Y. Chen (2020). “Wrong-way migrations of benthic species driven by ocean warming and larval transport.” Nature Climate Change. DOI: 10.1038/s41558-020-0894-x

Hart, D.R., Munroe, D.M., Caracappa, J.C., Haidvogel, D., Shank, B.V., Rudders, D.B., Klinck, J.M., Hofmann, E.E. and Powell, E.N. 2020. Spillover of sea scallops from rotational closures in the Mid-Atlantic Bight (United States). ICES Journal of Marine Science 77(5):1992-2002. DOI: 10.1093/icesjms/fsaa099

Emily Slesinger, Joseph A Langan, Barbara K Sullivan, David G Borkman, Theodore J Smayda. 2020. Multi-decadal (1972–2019) Mnemiopsis leidyi (Ctenophora) abundance patterns in Narragansett Bay, Rhode Island, USA. Journal of Plankton Research, fbaa035. DOI: 10.1093/plankt/fbaa035

Stanislas Von Euw, Thierry Azaïs, Viacheslav Manichev, Guillaume Laurent, Gérard Pehau-Arnaudet, Margarita Rivers, Nagarajan Murali, Daniel J. Kelly, and Paul G. Falkowski. June 22, 2020. Solid-State Phase Transformation and Self-Assembly of Amorphous Nanoparticles into Higher-Order Mineral Structures. J. Am. Chem. Soc. 142, 29: 12811–12825. DOI: 10.1021/jacs.0c05591

Maxim Y. Gorbunov ,Paul G. Falkowski. 2020. Using chlorophyll fluorescence kinetics to determine photosynthesis in
aquatic ecosystems. Limnology and Oceanography 9999:1-13. DOI: 10.1002/lno.11581

Hollstein, M., Mohtadi, M., Kienast, M., Rosenthal, Y., Groeneveld, J., Oppo, D.W., Southon, J. R. and A. Lückge. (2020). The impact of astronomical forcing on surface and thermocline variability across the Western Pacific Warm Pool over the past 160 kyr. Paleoceanography and Paleoclimatology. 35 (6), e2019PA003832

Akhtar, A.A., Santi, L.M., Griffiths, M., Becker, M., Rosenthal, Y., and J.A., Higgins. (2020). A record of the d44/40Ca and [Sr] of seawater over the last 100 million years from fossil elasmobranch tooth enamel. Earth and Planet. Sci. Lett. 543. DOI: 10.1016/j.epsl.2020.116354

Allen, K.A., Sikes, E.L., Anderson, R.F., and Y. Rosenthal. (2020). Rapid loss of CO2 from the South Pacific Ocean during the last 1 glacial termination. Paleoceanography and Paleoclimatology, 53

Li, L, J. Zhu, R.J. Chant, C Wang, L F. Pareja-Roman “Effects of dikes on saltwater intrusion under various wind conditions in the Changjiang Estuary Journal of Geophysical research-Oceans 125 (7), e2019JC015685 DOI: 10.1029/2019JC015685

Chant, R. J., D. K. Ralston, N. K. Ganju, C. Pianca, A. E. Simonson, and R. A. Cartwright (2020), Sediment Budget Estimates for a Highly Impacted Embayment with Extensive Wetland Loss, Estuaries and Coasts, 1-19. DOI: 10.1007/s12237-020-00784-3

Janine Barr, Christine Bean, Janice McDonnell. Aug 20, 2020. Strategies for Running a Successful Virtual Career Panel. Oceanography The Official Magazine of the Oceanography Society. DOI: 10.5670/oceanog.2020.220

M. R. Lindeman, F. Straneo, N. J. Wilson, J. M. Toole, R. A. Krishfeld, N. L. Beaird , T. Kanzow J. Schaffer, (2020). Ocean circulation and variability beneath Nioghalvfjerdsbræ (79 North Glacier) ice tongue. Journal of Geophysical Research: Oceans. e2020JC016091. DOI: 10.1029/2020JC016091

Kevin D. Friedland, Ryan E. Morse, James P. Manning, Donald Christopher Melrose, Travis Miles, Andrew G. Goode, Damian C. Brady, Josh T. Kohut, Eric N. Powell. 2020. Trends and change points in surface and bottom thermal environments of the US Northeast Continental Shelf Ecosystem. Fisheries Oceonography 29(5):396-414. DOI: 10.1111/fog.12485

Grothues, T. M., and K. W. Able. 2020. Shoreline infrastructure degradation and increasing littoral naturalization accommodates juvenile fish and crab assemblages in heavily urbanized Upper New York Harbor. Restoration Ecology 28(4):947-959. DOI: 10.1111/rec.13163

Maxim Y. Gorbunov,Evgeny Shirsin, Elena Nikonova, Victor V. Fadeev, Paul G. Falkowski. 2020. A multi-spectral fluorescence induction andrelaxation (FIRe) technique for physiological andtaxonomic analysis of phytoplankton communities. Marine Ecology Progress Series, 644:1-13. DOI: 10.3354/meps13358

Beaird, N. L., Shroyer, E. L., Juranek, L. W., Hales, B., & Goñi, M. A. (2020). Nutrient‐rich gravity current formed by upwelling in Barrow Canyon: High‐resolution observations. Journal of Geophysical Research: Oceans, 125, e2020JC016160. DOI: 10.1029/2020JC016160

Jonathan Sherman, Maxim Y. Gorbunov, Oscar Schofield, Paul G. Falkowski. 2020. Photosynthetic energy conversion efficiency in the West Antarctic Peninsula. Limonlogy and Oceanography. DOI: 10.1002/lno.11562

Carvalho, F., Gorbunov, M., Haskins, C., Oliver, M. J., Kohut, J., Aragon, D., Schofield, O. 2020. Mapping variable chlorophyll fluorescence using autonomous underwater gliders. Limnology and Oceanography Methods. DOI:10.1002/lom3.10380 PDF

Mike Eichhorn, David Aragon, Yuri A.W. Shardt, Hugh Roarty. August 2020. Modeling for the performance of navigation, control and data post-processing of underwater gliders. Applied Ocean Research Volume 101. DOI:10.1016/j.apor.2020.102191

Lovy, J., N. L. Lewis, S. E. Friend, K. W. Able, M. J. Shaw, G. S. Hinks, and P. J. Clarke. 2020. Host, seasonal and habitat influences on incidence of Lernaeenicus radiatus (Copepoda: Pennellidae) in the mid-Atlantic Bight.  Marine Ecology Progress Series 642:83-101. DOI:10.3354/meps13326 PDF

Ibironke O, McGuinness LR, Lu S-E, Wang Y, Hussain S, Weisel CP, and LJ Kerkhof.  2020.  Species-level evaluation of the human respiratory microbiome.  GigaScience 9: 1–10. DOI:10.1093/gigascience/giaa038

Dowden RA, McGuinness LR, Wisniewski PJ, Campbell SC, Guers JJ, Oydanich M, Vatner SF, Häggblom MM, and LJ Kerkhof.  2020.  Host genotype and exercise exhibit species-level selection for members of the gut bacterial communities in the mouse digestive system.  Nature Scientific Reports: 10:8984. DOI:10.1038/s41598-020-65740-4

Lim, H.; Miles, T.; Glenn, S.; Kim, D.; Kim, M.; Shim, J.; Chun, I., and Hwang, K., 2020. Rapid ocean destratification by typhoon Soulik over the highly stratified waters of west Jeju Island, Korea. In: Malvárez, G. and Navas, F. (eds.), Global Coastal Issues of 2020. Journal of Coastal Research, Special Issue No. 95, pp. 1480–1484. Coconut Creek (Florida), ISSN 0749-0208.

Conroy, J.A., Steinberg, D. K., Thibodeau, P. S., Schofield, O. 2020. Zooplankton diel vertical migration during Antarctic summer. Deep Sea Research II DOI:10.1016/j.dsr.2020.103324 PDF

Fei Chai, Kenneth S. Johnson, Hervé Claustre, Xiaogang Xing, Yuntao Wang, Emmanuel Boss, Stephen Riser, Katja Fennel , Oscar Schofield and Adrienne Sutton. (2020). Monitoring ocean biogeochemistry. Nature Reviews Earth and Environment.

Jennifer A. Hoey, F. Joel Fodrie, Quentin A. Walker, Eric J. Hilton, G. Todd Kellison, Timothy E. Targett, J. Christopher Taylor, Kenneth W. Able, Malin L. Pinsky. (March 2020).  Using multiple natural tags provides evidence for extensive larval dispersal across space and through time in summer flounder. Molecular Ecology. DOI: 10.1111/mec.15414

Gadkari PS, McGuinness LR, Männistö MK, Kerkhof LJ, and MM Häggblom. 2020. Arctic tundra soil bacterial communities active at subzero temperatures detected by stable isotope probing. FEMS Microbiology Ecology: doi: 10.1093/femsec/fiz192

Acquafredda, M., Munroe, D. 2020. The effect of species diversity on particle clearance and productivity in farmed bivalves. Marine Ecology Progress Series. 639:107-126. DOI:10.3354/meps13266

Martin, A., Boyd, P., Buesseler, K., Cetinic, I., Claustre, H., Giering, S., Henson, S., Irigoien, X., Kriest, I., Memery, L., Robinson, C., Saba, G., Sanders, R., Siegel, D., Alfageme, M.V., Guidi, L. 2020. Study the twilight zone before it is too late. Nature 580: 26-28, DOI: 10.1038/d41586-020-00915-7

Hunter-Thomson, K., Kohut, J., Saba, G. 2020. Empowering Students with Polar Science Through Real World Data. Current: The Journal of Marine Education 34(1): 13-18.

Valenti, J.L., T.M. Grothues, and K.W. Able. (May 2020). Juvenile fish assemblage recruitment dynamics in a Mid-Atlantic estuary: Before and after Hurricane Sandy. Marine Ecology Progress Series 641:177-193. DOI:10.3354/meps13309

Hoey, J.A., Fodrie, F.J., Walker, Q.A., Hilton, E.J., Kellison, G.T., Targett, T. E., Taylor, J.C., Able, K.W., and M.L. Pinsky. Using multiple natural tags provides evidence for extensive larval dispersal across space and through time in summer flounder. Molecular Ecology. accepted article. DOI: 10.1111/mec.15414

Pinsky, M. L., R. L. Selden, and Z. J. Kitchel Climate-Driven Shifts in Marine Species Ranges: Scaling from Organisms to Communities. Annual Review of Marine Science DOI:10.1146/annurev-marine-010419-010916

Hagai Raanan, Saroj Poudel, Douglas H. Pikec, Vikas Nanda, and Paul G. Falkowski. (2020). Small protein folds at the root of an ancient metabolic network. PNAS March 18, 2020. DOI:10.1073/pnas.1914982117

Greengrove, C., S. Lichtenwalner, H. Palevsky, A. Pfeiffer-Herbert, S. Severmann, D. Soule, S. Murphy, L. Smith, and K. Yarincik (2020), Using Authentic Data from NSF’s Ocean Observatories Initiative in Undergraduate Teaching: An Invitation, Oceanography, 33(1), DOI:10.5670/oceanog.2020.103.

Munroe DM, Grothues TM, Cleary NE, Daw J, Estrada S (2020). Oyster aquaculture does not impede spawning beach access for Atlantic horseshoe crabs Limulus polyphemus. Aquacult Environ Interact 12:81-90.

Borsetti, S., Munroe, D., Rudders, D., Chang, J.H. (2020). Timing of the reproductive cycle of waved whelk, Buccinum undatum, on the U.S. Mid-Atlantic Bight. Helgoland Marine Research. 74:5. DOI:10.1186/s10152-020-00537-6

Eirik Vinje Galaasen, Ulysses S. Ninnemann, Augustin Kessler, Nil Irvalı, Yair Rosenthal, Jerry Tjiputra, Nathaëlle Bouttes, Didier M. Roche, Helga (Kikki) F. Kleiven, David A. Hodell (2020). Interglacial instability of North Atlantic Deep Water ventilation. Galaasen et al., Science 367, 1485–1489.

Ferraro, C., Jordan, R., Kopp, R. E., Bond, S. L., Gong, J., Andrews, C. J., Auermuller, L. M., Herb, J., & McDonnell, J. (2020). Training Students to Improve Coastal Resilience. In A. Zimmerman (Ed.), Preparing Students for Community-Engaged Scholarship in Higher Education (pp. 347-360). Hershey, PA: IGI Global. DOI:10.4018/978-1-7998-2208-0.ch017

McDonnell, J., Hotaling, L., Schofield, O., Kohut, J. 2020. Key concepts in polar science: Coming to consensus on the essential polar literacy principles. Currents: Journal of Marine Education. 34(1): 2-8

McDonnell, J., Schofield, O., Bean, C. 2020. Bringing long-term ecological research (LTER) at Palmer Station Antarctica to your classroom. Currents: Journal of Marine Education. 34(1): 15-17

Liu, J., Q. Zeng, H. Wang, M. Teng, X. Guo, Z. Bao and S. Wang. 2020. The complete mitochondrial genome and phylogenetic analysis of the dwarf surf clam Mulinia lateralis. Mitochondrial DNA Part B 5(1):140-141. DOI:10.1080/23802359.2019.1698352

Heidi D. Yeh, Jennifer M. Questel, Kendra R. Maas, Ann Bucklin. 2020. Metabarcoding analysis of regional variation in gut contents of the copepod Calanus finmarchicus in the North Atlantic Ocean. Deep-Sea Research Part II

Heidi Yeh, Sarah A. Skubel, Harna Patel, Denia Cai Shi, David Bushek, Michael L. Chikindas. 2020. From Farm to Fingers: an Exloration of Probiotics for Oysters, from Production to Human Consumption. Probiotics and Antimicrobial Proteins. DOI:10.1007/s12602-019-09629-3

Optis, Mike, Andrew Kumler, George Scott, Mithu Debnath, and Pat Moriarty. 2020.Validation of RU-WRF, the Custom Atmospheric Mesoscale Model of the Rutgers Center for Ocean Observing Leadership. Golden, CO: National Renewable Energy Laboratory. NREL/TP-5000-75209.