Publications 2002

Weis, J.S. and P. Weis 2002. Contamination of saltmarsh sediments and biota by CCA treated wood walkways. Marine Pollution Bulletin 44: 504-510.

Weis, P., L. Windham, D.J. Burke and J.S. Weis 2002. Release into the environment of metals by two vascular salt marsh plants. Mar. Envir. Res. 54: 325-329

Weis, J.S. 2002. Tolerance to environmental contaminants in the mummichog, Fundulus heteroclitus. Human and Ecological Risk Assessment 8: 933-953.

Carletta, M.A., P. Weis and J.S. Weis 2002. Development of thyroid abnormalities in mummichogs, Fundulus heteroclitus, from a polluted site. Mar. Envir. Res. 54: 601-614.

Bergey, L., J.S. Weis and P. Weis. 2002. Mercury uptake by the estuarine species Fundulus heteroclitus and Palaemonetes pugio compared with their parasites, Eustrongylides and Probopyrus pandalicola. Mar. Poll. Bull. 44: 1046-1050.

Allam, B., C. Paillard and S. E. Ford. 2002. Pathogenicity of Vibrio tapetis, the etiological agent of Brown Ring Disease in clams. Dis. Aquat. Org. 48:221-231.

Ford, S. E., J. N. Kraeuter, R. D. Barber and G. Mathis. 2002. Aquaculture-associated factors in QPX disease of hard clams: density and seed-source. Aquaculture 208:23-38.

Allam, B., K. Ashton-Alcox and S. E. Ford. 2002. Flow cytometric comparison of haemocytes from three species of bivalve molluscs. Fish Shellfish Immunol. 13:141-158.

Allam, B., K. Ashton-Alcox and S. E. Ford. 2002. Flow cytometric measurement of hemocytes viability and phagocytic activity in the clam Ruditapes phllippinarum. J. Shellfish Res. 21(1):13-19.

Francis, J.A., 2002: Validation of reanalysis upper-level winds in the Arctic with independent rawinsonde data, Geophys. Res. Lett., 29, 10.1029/2001GL014578.

Groves, D.G. and J.A. Francis, 2002: The moisture budget of the Arctic atmosphere from TOVS satellite data, J. Geophys. Res., D19, 4391, doi:10.1029/2001JD001191.

Groves, D.G. and J.A. Francis, 2002: Variability of the Arctic Atmospheric Moisture Budget from TOVS Satellite Data, J. Geophys. Res., D24, 4785, doi:10.1029/2002JD002285.

Chen, Y., J.A. Francis, and J. R. Miller, 2002: Surface temperature of the Arctic: comparison of TOVS satellite retrievals with surface observations, J. Clim., 15, 3698-3708.

Chiacchio, M. and J. Francis, 2002: Evaluation of methods to estimate the surface downwelling longwave flux during Arctic winter, J. Appl. Meteor., 41, 306-318.

Schweiger, A.J., R.W. Lindsay, J.A. Francis, J. Key, J. Intrieri, and M. Shupe, 2002: Validation of TOVS Path-P data during SHEBA. J. Geophys. Res., 107(C10), 8041, 10.1029/2000JC000453.

Gao, Y., Nelson, E. D., field, M. P., Ding, Q., Li, H., Sherrell, R. M., Gigliotti, C. L., van Ry, D. A., Glenn T. R., Eisenreich, S. J. 2002. Characterization of atmospheric trace elements on PM2.5 particulate matter over the New York-New Jersey harbor estuary. Atmospheric Environment 36: 1077-1086.

Sikes, E. L. and M-A. Sicre, 2002, The relationship of the tetra-unsaturated C 37 alkenone to salinity and temperature: implications for paleo studies, Geochem., Geophys., Geosys. , 3 (11),doi: 10.1029/2002GC000345.

Sikes, E. L., W.R. Howard, H. L. Neil and J.K. Volkman, 2002, Glacial-interglacial sea surface temperature changes across the subtropical front east of New Zealand based on alkenone unsaturation ratios and foraminiferal assemblages, Paleoceaongraphy, 17 (2) , 10.1029/2001PA000640.

Bushek, D. S.E. Ford and M.M Chintala. 2002. Comparison of in vitro cultured and wild-type Perkinsus marinus III. Fecal elimination and its role in transmission. Dis. Aquat. Org., 51:217-225.

Ford, S.E., M.M.Chintala, and D. Bushek. 2002. Comparison of in vitro cultured and wild-type Perkinsus marinus I. Pathogen Virulence. Dis. Aquat. Org., 51:187-201.

Chintala, M.M., D. Bushek, and S.E. Ford. 2002. Comparison of in vitro cultured and wild-type Perkinsus marinus II. Dosing methods and host response. Dis. Aquat. Org., 51:203-216.

Miller, M.J. and K.W. Able. 2002. Movements and growth of tagged young-of-the-year Atlantic croaker, Micropogonias undulatus, in restored and reference marsh creeks in Delaware Bay. J. Exp. Mar. Biol. Ecol. . 267: 15-38.

McBride, R.S., M.P. Fahay and K.W. Able. 2002. Larval and settlement periods of the northern searobin (Prionotus carolinus) and the striped searobin (P. evolans). Fish. Bull. 100:63-73.

Goldberg, R., B. Phelan, J. Pereira, S. Hagan, P. Clark, A. Bejda, A. Calabrese, A. Studholme and K.W. Able. 2002. Variability in the distribution and abundance of young-of-the-year winter flounder, Pseudopleuronectes americanus, across habitat types in three northeastern U.S. estuaries. Estuaries 25: 215-226.

Able, K.W. 2002. Killifishes: Family Fundulidae pp. 292-297 In B.B. Collette and G. Klein-MacPhee (eds.) Bigelow and Scroeder’s Fishes of the Gulf of Maine. Smithsonian Institution Press, 3rd edition.

Able, K.W. 2002. Sea snails: Family Liparidae. pp. 368-374 In B.B. Collette and G. Klein-MacPhee (eds.) Bigelow and Scroeder’s Fishes of the Gulf of Maine. Smithsonian Institution Press, 3rd edition.

Able, K.W. 2002. Tilefishes: Family Malacanthidae. pp. 397-400 In B.B. Collette and G. Klein-MacPhee (eds.) Bigelow and Scroeder’s Fishes of the Gulf of Maine. Smithsonian Institution Press, 3rd edition.

Able, K.W., M.P. Fahay, K.L. Heck Jr., C.T. Roman, M.A. Lazzari and S.C. Kaiser. 2002. Seasonal distribution and abundance of fishes and decapod crustaceans in a Cape Cod estuary. Northeastern Naturalist 9(3): 285-302.

Able, K.W. and R.K. Cowen. 2002. Seasonal distribution and abundance of lobster (Homarus americanus) postlarvae in the New York Bight and an adjacent estuary. Bulletin of the New Jersey Academy of Sciences 47(2): 15-20.

Miller, M.J., P. M. Rowe and K.W. Able. 2002. Occurrence and growth rates of young-of-year northern kingfish, Menticirrhus saxatilis, on ocean and estuarine beaches in southern New Jersey. Copeia 3: 815-823.

Neuman, M.J. and K.W. Able. 2002. Quantification of ontogenetic transitions during the early life of a flatfish, windowpane, Scophthalmus aquosus (Pleuronectiformes Scophthalmidae). Copeia 3: 597-609.

Curran, M.C. and K.W. Able. 2002. Annual stability in the use of coves near inlets as settlement areas for winter flounder (Pseudopleuronectes americanus). Estuaries 25(2): 227-234.

Chant, R. J . 2002. Secondary flows in a region of flow curvature: relationship with tidal forcing and river discharge. Journal of Geophysical Research. 10.1029/2001JC001082, 21.

Ammerman, J.W. 2002. Phosphorus cycling in aquatic environments: Role of Bacteria. In, The Encyclopedia of Environmental Microbiology (G. Bitton, ed.). Vol. 5: 2448-2453. John Wiley & Sons, Inc.

Stocks, K.I. 2002. Flume experiments on post-settlement movement in polychaetes. Journal of Marine Research 60: 743-762

Lutz, R.A., T. Shank, P. Rona, A. Reed, W. Lange, S. Low, E. Kristof. 2002. Recent advances in imaging deep-sea hydrothermal vents . Cahiers de Biologie Marine, 43:267-269.

Chevaldonne, P., D. Jollivet, D. Desbruyeres, R.A. Lutz, R.C. Vrijenhoek. 2002. Sister-species of eastern Pacific hydrothermal-vent worms (Ampharetidae, Alvinellidae, Vestimentifera) provide new mitochondrial COI clock calibration. Cahiers de Biologie Marine, 43:367-370.

Hurtado, L.A. , M. Mateos, R.A. Lutz, R.C. Vrijenhoek. 2002. Molecular evidence for multiple species of Oasisia (Annelida: Siboglinidae) at eastern Pacific hydrothermal vents. Cahiers de Biology Marine, 43:377-380.

Kennish, M. J. 2002. Impacts of motorized watercraft on shallow estuarine and coastal marine environments. Journal of Coastal Research, Special Issue No. 37, 202 p.

Laursen, A.E. and Seitzinger, S.P. 2002. Measurement of denitrification in rivers: an integrated, whole reach approach. Hydrobiologia 485:67-81.

Laursen, A.E. and S.P. Seitzinger. 2002. The role of denitrification in nitrogen removal and carbon mineralization in Mid-Atlantic Bight sediments. Continental Shelf Research 22:1397-1416.

Laursen, A.E., S.P. Seitzinger, R. Dekorsey, J.G. Sanders, D.L. Breitburg and R.W. Osman. 2002. Multiple stressors in an estuarine system: effects of nutrients, trace metals, and trophic complexity on benthic photosynthesis and respiration. Estuaries 25(1):57-69.

Mayer, B., E.W. Boyer, C. Goodale , N.A. Jaworski, N. van Breemen, R.W. Howarth, S.P. Seitzinger, G. Billen, K. Lajtha, K. Nadelhoffer, D. Van Dam, L.J. Hetling, M. Nosil, K. Paustian and R. Alexander. 2002. Sources of nitrate in rivers draining sixteen watersheds in the northeastern U.S.: Isotopic constraints. Biogeochemistry 57/58:171-197.

Paerl, H., J. Dyble, L. Twomey, J. L. Pinckney, J. Nelson, and L. Kerkhof. 2002. Characterizing man-made and natural modifications of microbial diversity and activity in coastal ecosystems. Antonie van Leeuwenhoek 81: 487–507.

Peruzzi, S. and X. Guo. 2002. Tetraploid induction by meiosis inhibition with cytochalasin B in the dwarf surfclam, Mulinia lateralis Say: effects of temperature. J. Shellfish Res. , 21(2): 677-684.

Song, B., L. J. Kerkhof, Max M. Haggblom. 2002 Characterization of bacterial consortia capable of degrading 4-chlorobenzoate and 4-bromobenzoate under denitrifying conditions. FEMS Microbiology Letters. 213: 183-188

Sakano, Y. Pickering, K., Strom, P., and L. J. Kerkhof. 2002. Spatial Distribution of Total, Ammonia-Oxidizing, and Denitrifying Bacteria in Biological Wastewater Treatment reactors for Bioregenerative Life Support. Appl. Environ. Microbiol 68: 2285-2293

Falkowski, P. G . 2002. The Ocean’s Invisible Forest. Scientific American 287: 38-45.

Ezer, T., H.G. Arango and A.F. Shchepetkin, 2002, Developments in terrain-following ocean models: intercomparisons of numerical aspects, Ocean Modelling 4: 249-267

Bergmann, T. , Paerl, H., Pinckney, J., Richardson, T., Schofield, O. , 2002. Synergy of light and nutrients on the photosynthetic efficiency of phytoplankton populations from the Neuse River Estuary, North Carolina. Journal of Plankton Research, 24(9), p. 923-933.

Iskandarani, M., D. Haidvogel, J. Levin, E. Curchitser, C. Edwards, 2002, Multi-Scale Geophysical Modeling Using the Spectral Element Method, Computing in Science and Engineering 4 : 42-48.

Blackwell, S.M., Case, J., Glenn, S., Kohut, J. , Moline, M., Purcell, M., Schofield, O . and C VonAlt. VA 2002. New AUV Platform for Studying Near Shore Bioluminescence Structure In: Stanley, P. E. and Kricka, L. J. editors. Bioluminescence & Chemiluminescence Progress and Current Applications . Singapore: World Scientific, 197-200.

Bowen, M. M., W. J. Emery, J. L. Wilkin , P. C. Tildesley, I. J. Barton and R. Knewtson 2002, Extracting multi-year surface currents from sequential thermal imagery using the Maximum Cross Correlation technique, Journal of Atmospheric and Oceanic Technology , 19, 1665-1676.

Chang G. C., Dickey T. D., Schofield O., Weidemann A. D., Boss, E., Moline, M. A., Glenn. S. M. 2002. Nearshore physical forcing of bio-optical parameters in the New York Bight. Journal of Geophysical Research 10.1029/2001JC001018.

Chant, R. J. 2002 Secondary circulation in a region of flow curvature: Relationship with tidal forcing and river discharge , J. Geophys. Res. , 107 ( C9 ), 3131 , doi: 10.1029/2001JC001082 .

Creed, E.L ., C. Mudgal, S.M. Glenn, O.M. Schofield, C.P. Jones and D.C. Webb, 2002. Using a fleet of Slocum Battery Gliders in a regional scale coastal ocean observatory. MTS/IEEE Conference Proceedings, Biloxi, MS. Vol. 3, pp. 1234-1238.

Fahnenstiel, G. L., Beckman, C., Lohrenz, S. E., Millie, D. F., Schofield, O. , McCormick, M. J. 2002. Standard Niskin and Van Dorn bottles inhibit phytoplankton photosynthesis in Lake Michigan. Verh. Internat. Verein. Limnol. 28:376-380.

Grzymski, J., O. Schofield , P. G. Falkowski, J. M. Bernhard 2002. The function of plastids in the deep-sea benthic foraminifer, Nonionella stella. Limnology & Oceanography , 47(6), 1569–1580.

Hare, J., Churchill, J., Cowen, R., Berger, T., Cornillon, P. Dragos, P., Glenn, S. , Govoni, J., Lee, T., 2002. Routes and rates of larval fish transport from the southeast to the northeast United States continental shelf. Limnology and Oceanography 47(6), p. 1774-1789.

Keen, T. and S.M. Glenn , 2002. Predicting Bed Scour on the Continental Shelf During Hurricane Andrew, Journal of Waterway, Port, Coastal and Ocean Engineering, , 249-257.

Kennish, M. J. 2002. Environmental threats and environmental future of estuaries. Environmental Conservation, 29:78-107.

Kennish, M. J. (ed.). 2002. Impacts of motorized watercraft on shallow estuarine and coastal marine environments. Journal of Coastal Research, Special Issue No. 37, 202 p.

Kennish, M. J. and R. J. Orth. 2002. Introduction. Journal of Coastal Research, SI 37:3-6.

Kennish, M. J. 2002. Sediment contaminant concentrations in estuaries and coastal marine environments: potential for remobilization by boats and personal watercraft. Journal of Coastal Research, SI 37:151-178.

Kennish, M. J. 2002. Conclusions and recommendations. Journal of Coastal Research, SI 37:192-196.

Kennish, M. J. and S. O’Donnell. 2002. Water quality monitoring in the Jacques Cousteau National Estuarine Research Reserve System. /Bulletin of the New Jersey Academy of Science/, 47:1-13.

Komada, T., Schofield, O. , Reimers, C. 2002. Fluorescence characteristics of organic matter released from coastal sediments during resuspension. Marine Chemistry. 79(2): 81-97 .

Millie, D. F., Fahnenstiel, G. L., Lohrenz, S. E., Schofield , O. 2002. Relating episodic physical and meterological forcing to phytoplankton group dynamics in Southeastern Lake Michigan during the spring isothermal. Journal of Phycology 38: 639-648.

Millie, DF, Fahnenstiel, GL, Carrick, HJ, Lohrenz, SE, Schofield, O 2002 Phytoplankton pigments in coastal Lake Michigan: distributions during the spring isothermal period and relation with episodic sediment resuspension, Journal of Phycology , 38, 1-11.

Millie, DF, Fahnenstiel, GL, Carrick, HJ, Lohrenz, SE, Schofield, O 2002 Spatial variation in Lake Michigan phytoplankton assemblages during sediment resuspension events, Verhandlungen der Internationalen Vereinigung fur Theoretische und Angewandte Limnologie , 28, 1216-1220.

Millie, D. F., Schofield, O., Kirkpatrick, G. J. , Johnsen, G., Evens, T. J. 2002. Using absorbance and fluorescence spectra to discriminate microalgae. Europeean journal of Phycology . 37(3): 313-322.

Moline, M., Schofield, O. , Gryzmski, J. 2002. Impact of dynamic light and nutrient environments on phytoplankton communities in the coastal ocean. In: Modeling Dynamic Systems: Dynamic Modeling for Marine Conservation Ecological Understanding. Lindholm, J. and Ruth, M. (eds) Springer Verlag 144-163.

Ridgway, K.R., J. R. Dunn J. and J. Wilkin 2002, Ocean interpolation by 4-dimensional weighted least squares: Application to the waters around Australasia, Journal of Atmospheric Oceanic Techology, 19, 1357-1375.

Schofield, O., S. Glenn, R. Chant, M. A. Moline, P. Bissett , D. Haidvogel, and J. Wilkins, 2002. The evolution of a nearshore coastal observatory and the establishment of the New Jersey Shelf Observing System . Oceanology International 2002.

Schofield , O ., Bergmann, T., Bissett, W. P., Grassle, F., Haidvogel, D., Kohut, J. , Moline, M., Glenn, S. 2002. The Long-Term Ecosystem Observatory: An Integrated Coastal Observatory. Journal of Oceanic Engineering. 27(2): 146-154.

Styles, R. and S.M. Glenn , 2002. Modeling bottom roughness in the presence of wave-generated ripples, Journal of Geophysical Research, 107, C8, 24/1-24/15.

Wang, Z., X Guo, S.K. Allen, Jr. and R. Wang. 2002. Heterozygosity and body size in triploid Pacific oysters, Crassostrea gigas Thunberg, produced from meiosis II inhibition and tetraploids. Aquaculture , 204(3-4):337-248.

Wilkin, J. L., M. M. Bowen and W. J. Emery (2002), Mapping mesoscale currents by optimal interpolation of satellite radiometer and altimeter data, Ocean Dynamics , 52, 95-103.