Coastal Ocean Dynamics and Prediction Posters by LEO-15 Researchers
2000 Ocean Sciences Meeting
Details


Coastal Ocean Dynamics and Prediction II Posters

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SS: OS22D
LO: CC:Hall C
DA: Tuesday
HR: 1330h
SN: Coastal Ocean Dynamics and Prediction II Posters
PR: O M Schofield, Rutgers University
MN: 2000 Ocean Sciences Meeting


LEO-15 Records Remote Sensing, Meteorological and In Situ Ocean Data From the Eye of Hurricane Floyd

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HR: 1330h
AN: OS22D-10
TI: LEO-15 Records Remote Sensing, Meteorological and In Situ Ocean Data From the Eye of Hurricane Floyd
AU: * Crowley, M F
EM: crowley@atlantic.rutgers.edu
AF: Institute of Marine and Coastal Sciences Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901 United States
AU: Glenn, S M
EM: glenn@caribbean.rutgers.edu
AF: Institute of Marine and Coastal Sciences Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901 United States
AU: Fracassi, J F
EM: johnf@arctic.rutgers.edu
AF: Institute of Marine and Coastal Sciences Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901 United States
AU: Kohut, J T
EM: kohut@arctic.rutgers.edu
AF: Institute of Marine and Coastal Sciences Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901 United States
AB: The eye of Hurricane Floyd passed directly over the Rutgers University Longterm Ecosystem Observatory (LEO-15), as it moved up the eastern seaboard on September 16, 1999, resulting in extreme flooding. An expanded observational network normally used to research coastal upwelling events, was left in place after this summer's field season was completed. Data sets collected continuously through the eye of of Hurricane Floyd included: AVHRR visible and sea surface temperature imagery, SeaWiFS visible imagery, CODAR surface currents, a variety of meteorological data, underwater data including wave heights and periods, current profiles, tides, storm surges, temperature and salinity data. Meteorological and oceanographic responses to the arrival of the eye included a drop in barometric pressure, shifts in wind speed and rapid reversal of wind directions, a spike in wave height and a steady drop in wave period, initially onshore currents switching to offshore and a positive storm surge reversing to negative. These observations demonstrate the utility of longterm observation networks in capturing significant episodic events.
UR: http://marine.rutgers.edu/mrs/images/floyd/floyd.html
DE: 3339 Ocean/atmosphere interactions (0312, 4504)
DE: 3360 Remote sensing
DE: 3384 Waves and tides
DE: 4546 Nearshore processes
DE: 4560 Surface waves and tides (1255)
SC: OS
MN: 2000 Ocean Sciences Meeting


Surfclam Larval Settlement: Spatial and Temporal Differences With Respect to Larval Supply

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HR: 1330h
AN: OS22D-07
TI: Surfclam Larval Settlement: Spatial and Temporal Differences With Respect to Larval Supply
AU: * Ma, H
EM: hgma@eden.rutgers.edu
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901 United States
AU: Grassle, J P
EM: jgrassle@imcs.rutgers.edu
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901 United States
AU: Butman, C
EM: cbutman@whoi.edu
AF: AOPE Department, Woods Hole Oceanographic Institution, \#\# Water Street, MS#\#\#, Woods Hole, MA 02543 United States
AU: Petrecca, R F
EM: petrecca@imcs.rutgers.edu
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901 United States
AB: Six consecutive sets of settlement experiments were carried out at three stations at an inner continental shelf site (LEO-15) from July 8-31, 1997 during upwelling and downwelling periods. Two inshore stations were on the landward and seaward sides of Beach Haven Ridge at $\sim$ 12 m depth, and the third station was 8 km offshore at $\sim$ 20 m depth. Sediments at all three stations were fine to medium-fine sands typical of surfclam habitat in the Mid-Atlantic Bight. Long-term benthic studies (1993 to present) indicate that only the two inshore stations support substantial surfclam populations. In each experiment, four replicate trays of azoic sand from Beach Haven Ridge were placed flush with the seafloor and exposed for 3 to 5 days. Sediments were preserved and examined for recently settled bivalves. Bivalve larval supply during the experiments was examined using Moored Automated Serial Zooplankton Pumps (MASZPs) at the three stations. Zooplankton samples were taken 1 mab every 4 hours. Pulses of high surfclam abundance coincided with downwelling, and larval abundances were higher at the two inshore stations than offshore. Preliminary results from the settlement tray experiments indicate higher settlement at the two inshore stations; surfclam settlement was higher during downwellling than upwelling at two stations, one inshore and one offshore.
DE: 4219 Continental shelf processes
DE: 4279 Upwelling and convergences
DE: 4804 Benthic processes/benthos
DE: 4855 Plankton
SC: OS
MN: 2000 Ocean Sciences Meeting


The Impact of Sea Breezes and Synoptic Winds on Marine Coastal Flows

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HR: 1330h
AN: OS22D-08
TI: The Impact of Sea Breezes and Synoptic Winds on Marine Coastal Flows
AU: * Pan, H
EM: pan@cep.rutgers.edu
AF: Rutgers University - Center for Environmental Prediction, \#\# College Farm Road, New Brunswick, NJ 08901-8551
AU: Avissar, R
EM: avissar@gaia.rutgers.edu
AF: Rutgers University - Center for Environmental Prediction, \#\# College Farm Road, New Brunswick, NJ 08901-8551
AU: Haidvogel, D A
EM: dale@ahab.rutgers.edu
AF: Rutgers University - Institute of Marine and Coastal Sciences, \#\# Dudley Road, New Brunswick, NJ 08901-8521
AU: Glenn, S M
EM: glenn@caribbean.rutgers.edu
AF: Rutgers University - Institute of Marine and Coastal Sciences, \#\# Dudley Road, New Brunswick, NJ 08901-8521
AB: Irregular coast lines, heterogeneous land cover and sea surface temperature (SST) affect the structure and intensity of sea-breezes in complicated ways. Mostly due to computing resources limit, current operational forecasting models do not resolve very well this type of atmospheric circulations. Ocean models forced with forecasts that do not reproduce correctly these circulations may not be able to correctly reproduce observed marine coastal flows. In July 1999, the Regional Atmospheric modeling System (RAMS) was used operationally, with a grid size of 4 x 4 km$^2$, to forecast coastal weather in the northeast US. Using an extended network of observations (including buoys, radars, sodars, and meteorological towers), we show that the model was able to capture the detailed features of the sea-breezes that develop on the New Jersey coast. We find that sea-breezes in that region can significantly divert from synoptic winds. When southerly winds prevail, significant positive wind curls form above the ocean near the shore. On the other hand, northerly winds result in negative wind curls. The intensity and the spatial scale of these wind curls depend on the synoptic winds and sea-breezes, and the maximum spatial extent of these curls can be as large as 50 km off-shore. We also find that sea-breezes can trigger thunderstorms and also affect the track of thunderstorms developing elsewhere.
DE: 3329 Mesoscale meteorology
DE: 3337 Numerical modeling and data assimilation
DE: 4223 Descriptive and regional oceanography
DE: 4247 Marine meteorology
DE: 4504 Air/sea interactions (0312)
SC: OS
MN: 2000 Ocean Sciences Meeting


Bacterial Community Fingerprints and Activity in a NearShore, Subsurface Jet at LEO-15

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HR: 1330h
AN: OS22D-13
TI: Bacterial Community Fingerprints and Activity in a NearShore, Subsurface Jet at LEO-15 (a Long Term Ecosystem Observatory off the New Jersey Coastline)
AU: * Kerkhof, L
EM: kerkhof@ahab.rutgers.edu
AF: Inst. of Marine \& Coastal Sci., \#\# Dudley Rd Cook College Rutgers University, New Brunswick, NJ 08901-8521 United States
AU: Rodriguez, A
AF: Inst. of Marine \& Coastal Sci., \#\# Dudley Rd Cook College Rutgers University, New Brunswick, NJ 08901-8521 United States
AB: The southern coast of New Jersey experiences periodic upwelling events which can significantly influence biological communities. A long term ecosystem observatory has been established at a site in 15m of water near the Rutgers Unversity Marine Field Station (LEO-15) to study the interaction between physical forcing and biological/chemical processes in the coastal ocean. Previous work has shown that upwelling in 1995 had influenced the phytoplankton and bacterial community. Unfortunately, the source waters for upwelling had not been characterized during the 1995 event. In this study, we sampled along a nearshore, subsurface jet believed to be supplying the cold water for upwelling at LEO-15. Samples were collected along a 30 km transect to determine whether differences between the jet microbial communities and surface waters or offshore communities could be detected. Bacterial populations were fingerprinted using the 16S rRNA genes and TRFLP methodologies using MnlI digestion. A similarity index of TRFLP patterns indicated 72\% of the microbial community was present in both the jet and surface waters. However, significant TRLP peaks could be identified which were present in the jet and below detection limits in surface waters (e.g. 141, 193, and 287 bp). Conversely, specific peaks were present in surface waters and below detection in the jet (e.g. 80, 83, 212 bp). Additionally, uptake experiments were conducted using a DNA analogue (bromo deoxyuridine) to target the active population within the jet. The indigenous population of bacteria in the jet and suface waters were found to take up BrDU at a concentration of 200 nM over a 1 hour incubation. Experiments are underway to isolate the BrDU labeled DNA and characterize the active bacterial community.
DE: 4803 Bacteria
DE: 4840 Microbiology
SC: OS
MN: 2000 Ocean Sciences Meeting


Coastal Turbulence Estimates in Ocean Modeling and Observation Studies Near LEO-15

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HR: 1330h
AN: OS22D-11
TI: Coastal Turbulence Estimates in Ocean Modeling and Observation Studies Near LEO-15
AU: * Levine, E R
EM: levineer@tech.npt.nuwc.navy.mil
AF: Naval Undersea Warfare Center, Division Newport Code \#\#, Newport, RI 02841 United States
AU: Lueck, R G
AF: Centre for Earth and Ocean Sciences, University of Victoria, Victoria, BC V8W 2Y2 Canada
AU: Shell, R R
AF: Naval Undersea Warfare Center, Division Newport Code \#\#, Newport, RI 02841 United States
AU: Licis, P
AF: Naval Undersea Warfare Center, Division Newport Code \#\#, Newport, RI 02841 United States
AB: In the context of the LEO-15 network, microstructure data have been obtained from a small REMUS AUV instrumented with a comprehensive suite of turbulence sensors. Instrumentation included shear probes and an ultra-fast thermistor, two CTDs, an upward and downward looking ADCP, and an ADV-O. This data acquisition enables estimates of dissipation rate, vertical shear of horizontal velocity, and stratification; and consequently mixing parameters such as Richardson number, eddy viscosity, and eddy diffusivity. These estimates are utilized to characterize subgrid scale processes in the SCRUM model, and compare turbulence closure approaches. During July 1999, a field experiment was conducted in the LEO-15 region off New Jersey, to examine mixing processes associated with wind-driven upwelling. Using model-based adaptive sampling, the AUV was deployed along trajectories through components of the local emerging upwelling circulation. Eleven missions were flown in the upstream coastal "pipe", the downstream coastal "pipe", and the detached offshore "jet", at a variety of depths in the core of the features, and in the top and bottom layers. For the final model prediction cycle, the data derived eddy viscosity in the upstream pipe was utilized as the inshore maximum value for the SCRUM sub-grid scale paramaterization. Subsequent to the experiment, 2-D diagnostic runs of the SCRUM model show that the data-derived eddy viscosity, and variation around its value can significantly affect the onset and character of the upwelling.
DE: 4528 Fronts and jets
DE: 4568 Turbulence, diffusion, and mixing processes
SC: OS
MN: 2000 Ocean Sciences Meeting


Spatial Distribution of Bottom Stress and Sediment Transport Patterns over Transitional Bathymetry B

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HR: 1330h
AN: OS22D-09
TI: Spatial Distribution of Bottom Stress and Sediment Transport Patterns over Transitional Bathymetry Beneath a Narrow Subsurface Jet
AU: * Styles, R
EM: styles@imcs.rutgers.edu
AF: Rutgers University, \#\# Dudely Rd, New Bruswick, NJ 08901 United States
AU: Glenn, S M
EM: glenn@caribbean.rutgers.edu
AF: Rutgers University, \#\# Dudely Rd, New Bruswick, NJ 08901 United States
AB: One of the goals of the recently completed Coastal Predictive Skill Experiment was to improve forecasting capabilities though stronger modeling and observational efforts of the complex structure of wave-current bottom boundary layers. Theoretical and experimental results from this and past research efforts culminated in a new bottom boundary layer model (BBLM) that can be implemented as a subroutine in large-scale shelf circulation models. A version of the BBLM was used to investigate sediment transport and bottom stress over transitional topography during an intense observational period in July 1999 at the Rutgers University Long-term Ecosystem Observatory (LEO-15) located off the southern coast of New Jersey. On July 29, 1999, multiple cross-shelf transects consisting of ship-towed ADCP and undulating CTD surveys centered on LEO-15 captured an alongshore section of a recently discovered subsurface jet associated with recurrent upwelling centers. The northern most transect was characterized by smoother and deeper topography and showed maximum alongshore current speeds within the jet of nearly 20 cm/s. The southern most transect was characterized by rougher and shallower topography and showed alongshore current speeds of about 25 cm/s. Wave data obtained from a pressure sensor attached to a subsea node at LEO-15 and bottom currents obtained from the towed ADCP surveys were used to drive the BBLM along the 2 transect lines described above. Results from the northern line showed time average shear velocity estimates with peak values of nearly 1.5 cm/s near shore, and a reduction to 0.5 cm/s over the deeper portions further offshore. Along the shallower and rougher southern transect, shear velocities were more variable and showed several peaks near 2 cm/s associated with local topographic highs. Combined wave and current shear velocities peaked at 6.5 cm/s at the shoreward most point along the southern line but only 4 cm/s along the northern line. For these conditions, model predictions indicated that initiation of sediment motion only occurred for shear velocities greater than about 5 cm/s. Therefore, sediment resuspension was confined to the inner most section of the shallower and rougher southern transect, and it occurred only as a result of wave-current interaction. These preliminary model results suggest that the jet may entrain bed material along its southern reach before it turns offshore into deeper water. Once the jet moves into deeper water, where bottom currents and bottom wave orbital velocities are weaker, the entrained benthic material will begin to fall out of suspension. The jet may, therefore, serve as an efficient cross- shelf transport conduit during summer time upwelling along the southern New Jersey coast.
DE: 4211 Benthic boundary layers
DE: 4546 Nearshore processes
SC: OS
MN: 2000 Ocean Sciences Meeting


Variability of the Spectral Signatures of Coastal Waters Measured and Modeled for the LEO-15 Site

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HR: 1330h
AN: OS22D-12
TI: Variability of the Spectral Signatures of Coastal Waters Measured and Modeled for the LEO-15 Site
AU: * Tozzi, S
EM: stozzi@imcs.rutgers.edu
AF: Rutgers University, Institute of Marine and Coastal Sciences \#\#, Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Schofield, O M
EM: oscar@imcs.rutgers.edu
AF: Rutgers University, Institute of Marine and Coastal Sciences \#\#, Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Grzymski, J J
EM: grzymski@ahab.rutgers.edu
AF: Rutgers University, Institute of Marine and Coastal Sciences \#\#, Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Bergmann, T
EM: bergmann@arctic.rutgers.edu
AF: Rutgers University, Institute of Marine and Coastal Sciences \#\#, Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Moline, M A
EM: mmoline@calpoly.edu
AF: California Polytechnic State University, Biological Sciences Department, , San Luis Obispo, CA 93407 United States
AU: Peterson, D
EM: dpeterso@polymail.calpoly.edu
AF: California Polytechnic State University, Biological Sciences Department, , San Luis Obispo, CA 93407 United States
AB: Due to the high variability that characterizes case II waters, precise derivation of absorption (a) and total scattering (b) from remote sensing reflectance (Rrs) by means of bio-optical algorithms is critical for a proper use of remote sensing data. In July 1999, a series of in situ bio-optical measurements were conducted in southern NJ at the LEO-15 site (Long-term Ecosystem underwater Observatory), a real-time multi-platform inter-disciplinary observation network. Continuously sampled transects of nearshore in situ optical properties were conducted as part of the Coastal Predictive Skill Experiment sponsored by NOPP/ONR. The comprehensive optical instrumentation package aboard the R/V Walford, included a Wetlabs AC-9 (absorption and attenuation meter at 9 wavelengths), Wetlabs SaFIre (in situ fixed wavelength spectrofluorometer), Satlantic OCR (Ocean Color Radiometer), Hyper-TSRB (14 channels Hyperspectral Tethered Spectral Radiometer Buoy), Hobi Labs Hydroscat 6, Falmouth Scientific Inc. (FSI) CTD (Conductivity Temperature Depth), Sequoia Scientific LISST-100 (Laser In-Situ Scattering and Transmissometry) and a Wetlabs MODAPS (Modular Data Acquisition System). Bio-optical measurements were aimed at determining the effects of upwelling events on the inherent and apparent optical properties of the water column, then to estimate the water leaving radiance. The collected data have been used to characterize the impact of coastal upwelling episodes in shallow waters (5-30 m) on nearshore bulk optical properties. Utilizing the Hydrolight 4.0 Radiative Transfer numerical model we reproduce the spectral signature of the coastal waters. Hydrolight was run repeatedly with different settings and different boundary conditions, to determine the role that in water constituents (chlorophyll, suspended sediments and particulate organic matter) have on spectral absorption and scattering, and their influence on the remote sensing reflectance. Results of the study will allow a critical evaluation of the sensitivity of proposed remote sensing algorithms and their
UR: http://marine.rutgers.edu/mrs/
DE: 4219 Continental shelf processes
DE: 4279 Upwelling and convergences
DE: 4294 Instruments and techniques
DE: 4546 Nearshore processes
DE: 4552 Ocean optics
SC: OS
MN: 2000 Ocean Sciences Meeting



Habitat and Community Patchiness on the Continental Shelf (LEO-15)

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HR: 10:35h
AN: OS51C-08
TI: Habitat and Community Patchiness on the Continental Shelf (LEO-15)
AU: * Grassle, J F
EM: grassle@imcs.rutgers.edu
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Gregg, J C
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Petrecca, R F
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Snelgrove, P V
AF: Fisheries Conservation Chair, Memorial University of Newfoundland, Box \#\#\#\#, St. John's, NF A1C 5R3 Canada
AU: Stocks, K I
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901-8521 United States
AU: Grassle, J P
AF: Institute of Marine and Coastal Sciences, Rutgers University, \#\# Dudley Road, New Brunswick, NJ 08901-8521 United States
AB: Spatial scales of macrofaunal benthic community composition were determined using a nested sampling design at the Long-term Ecosystem Observatory site (LEO-15) on the continental shelf off New Jersey. During 1994 and 1995, at each of three sites between 12 and 16 m depth, samples were taken at random by divers around the base of a shore-oblique ridge (5km long and 1 km wide) on two spatial scales (100 m and 30 m). Community structure among the sites was different, but these differences were blurred by species-by-species variation at the 100-m scale within sites. Crest-trough comparisons on rippled bottoms indicated greater numbers of individuals in troughs, but species population differences between crest and trough were generally not significant. Diversity patterns changed depending on the scales over which comparisons were made. Comparisons of individual cores suggested that the muddy site was higher in diversity than the sandy site, but as cores were pooled to achieve greater spatial coverage, the sandy site appeared more diverse. This pattern suggests that patchiness may differ among sites, in that the muddy site has greater diversity at a very local scale but the patchier sandy site accumulates more species over larger scales.
DE: 4804 Benthic processes/benthos
DE: 4815 Ecosystems, structure and dynamics
SC: OS
MN: 2000 Ocean Sciences Meeting


Horizontal Heterogeneity of Denitrifying Bacterial Communities In Marine Sediments by TRFLP Analysis

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HR: 1330h
AN: OS42D-16
TI: Horizontal Heterogeneity of Denitrifying Bacterial Communities In Marine Sediments by TRFLP Analysis
AU: * Scala, D J
EM: djscala@rci.rutgers.edu
AF: Dept. of Chemical and Biochemical Engineering, \#\# Brett Rd. Busch Campus Rutgers University, Piscataway, NJ 08854 United States
AU: Kerkhof, L J
EM: kerkhof@ahab.rutgers.edu
AF: Inst. of Marine \& Coastal Sci., \#\# Dudley Rd Cook College Rutgers University, New Brusnwick, NJ 08901-8521 United States
AB: Horizontal heterogeneity in time and space of denitrifying bacteria was examined in continental shelf sediments off Tuckerton, NJ at the Rutgers University Long Term Ecosystem Observatory (LEO-15) using PCR amplification of the nitrous oxide reductase (nosZ) gene combined with terminal restriction fragment length polymorphism (TRFLP) analysis. Spatial scales from centimeters to kilometers were examined, while temporal variation was assayed over the course of 1995-96. Sorenson's indices (pairwise similarity values) were calculated to permit comparison between samples. Similarity of benthic denitrifiers ranged from 0.80 to 0.85 for centimeter scale comparisons, from 0.52 to 0.79 for meter level comparisons, and from 0.23 to 0.53 for kilometer scale comparisons. The Sorenson's indices for temporal comparisons varied from 0.12 to 0.74. A cluster analysis of the similarity values indicated that the composition of the denitrifier assemblages varied most significantly at the kilometer scale and between seasons at individual stations. Specific nosZ genes were identified which varied at cm/m/ or km scales, and may be associated with variability in meio/macrofaunal abundance (cm scale), bottom topography (m scale), or sediment characteristics (km scale).
DE: 4803 Bacteria
DE: 4805 Biogeochemical cycles (1615)
DE: 4840 Microbiology
SC: OS
MN: 2000 Ocean Sciences Meeting


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