Publications 2018

Lutz, R.A. 2018. Preface: Identification of larval and post-larval bivalve molluscs.  Journal of Shellfish Research 37:245.

Goodwin, J.D., R.A. Lutz, S. Johnson, V.S. Kennedy and S. Gallager. 2018. Optical imaging and molecular sequencing of a preserved collection of bivalve larvae.  Journal of Shellfish Research 37:449-466.

Lutz, R.A., J. D. Goodwin, B.S. Baldwin, G. Burnell, M. Castagna, S. Chapman, A. Chestnut, P. Dabinett, C. Davis, A.G. Eversole, S. C..Fuller, S.M. Gallager, R. Godberg, J. Goodsell, J. Grassle, R. G. Gustafson, H. Hidu, Y. Hu, D. Jablonski, S. Johnson, V. S. Kennedy, M. Le Pennec, R. Mann, C. Newell, A.S. Pooley, A.S. Tan, R.C. Vrijenhoek & A. Partridge. 2018. Scanning electron microscopic aids for identification of larval and post-larval bivalves.  Journal of Shellfish Research 37:247-448.

Wolfson SJ, Porter AW, Kerkhof LJ, McGuinness LM, Prince RC, LY Young. 2018. Sulfate-Reducing Naphthalene Degraders Are Picky Eaters. Microorganisms. doi:10.3390/microorganisms6030059

McDonnell, J., deCharon, A., Lichtenwalner, C.S., Hunter-Thomson, K., Halversen, C., Schofield, O., Glenn, S., Ferraro, C., Lauter, C., and Hewlett, J. (2018). Education and public engagement in OOI: Lessons learned from the field. Oceanography 31(1):138–146

Levin, J., J. Wilkin, N. Fleming and J. Zavala-Garay, (2018), Mean circulation of the Mid-Atlantic Bight from a climatological data assimilative model, Ocean Modelling, 128, 1-14, DOI:10.1016/j.ocemod.2018.05.003

Feng, H., D. Vandemark, and J. Wilkin, (2018), Examining the accuracy of GlobCurrent upper ocean velocity data products on the Northwestern Atlantic shelf, Rem. Sensing, 10, 1205; DOI:10.3390/rs10081205

Wilkin, J. Levin, A. Lopez, E. Hunter, J. Zavala-Garay, and H. Arango, 2018: A coastal ocean forecast system for the U.S. Mid-Atlantic Bight and Gulf of Maine. In New Frontiers on Operational Oceanography, E. Chassignet, A. Pascual, J. Tintore, and J. Verron, Eds., GODAE OceanView, 593-624, doi:10.17125/gov2018.ch21.

Sikes, E. L., Organics, Sources and Depositional Environments In: White W. (eds) Encyclopedia of Geochemistry. Encyclopedia of Earth Sciences Series. Springer, International Publishing AG https://doi.org/10.1007/978-3-319-39193-9_165-1 pdf

Ben-Horin, T., C. Burge, D. Bushek, M. Groner, D. Proestou, L. Huey, G. Bidegain, R. Carnegie. 2018 Intensive oyster aquaculture can reduce disease impacts to sympatric wild oysters. Aquacult. Environ. Interact., 10:557–567. https://doi.org/10.3354/aei00290

Toth, J., S. Evert, E. Zimmermann, M. Sullivan, L. Dotts, K. W. Able, R. Hagan, and C. Slocum. 2018. Annual residency patterns and diet of Phoca vitulina concolor (West Atlantic Harbor Seal) in a southern New Jersey estuary. Northeastern Naturalist 25(4):611-626

Caracappa, J.C., Munroe, D.M. 2018. Morphological Variability Among Broods of First-Stage Blue Crab (Callinectes sapidus) Zoeae. Biological Bulletin. 235: 123–133. https://doi.org/10.1086/699922

Ford, S.E., Stokes, N.A., Alcox, K.A., Kraus, B.S.F., Barber, R.D., Carnegie, R.B. and Burreson, E.M., 2018. Investigating The Life Cycle of Haplosporidium nelsoni (Msx): A Review. Journal of Shellfish Research, 37(4): 679-693.

Hofmann, E., Powell, E., Klinck, J., Munroe, DM., Mann, R., Haidvogel, D., Narváez, DA, Zhang, X., Kuykendall, KM. 2018. An Overview of Factors Affecting Distribution of the Atlantic Surfclam (Spisula solidissima), a Continental Shelf Biomass Dominant, During a Period of Climate Change. Journal of Shellfish Research, 37(4): 821-831. http://www.bioone.org/doi/10.2983/035.037.0412

Dodson, T., T. M. Grothues, J. H. Eiler, J. A. Dobarro, and R. Shome. 2018. Acoustic telemetry payload control of an autonomous underwater vehicle for mapping tagged fishes. Limnology and Oceanography: Methods. 1-13.https://doi.org/10.1002/lom3.10280

Able, K. W., C. J. Welsh, and R. Larum. 2018. Salt marsh peat dispersal: Habitat for fishes, decapod crustaceans, and bivalves. Chapter 2, Pp. 9-28 In: Peat, Intech Ltd., Rijeka, Croatia.http://dx.doi.org/10.5772/intechopen.74087

Watts, J., Carroll, J., Munroe, D., Finelli, C. 2018. Examination of the potential relationship between boring sponges and pea crabs and their effects on eastern oyster condition. Diseases of Aquatic Organisms 130: 25-36 DOI: https://doi.org/10.3354/dao03257

Feehan, C. J., Ludwig, Z., Yu S., Adams D. K. 2018. Synergistic negative effects of thermal stress and altered food resources on echinoid larvae. Scientific Reports 8:12229.

Archer, C.L., A. Vasel-Be-Hagh, C. Yan, S. Wu, Y. Pan, J. F. Brodie, A. E. Maguire (2018). Review and evaluation of wake loss models for wind energy applications. Applied Energy, 226: 1187-1207. https://doi.org/10.1016/j.apenergy.2018.05.085

Fuchs, H. L., G. P. Gerbi, E. J. Hunter and A. J. Christman (2018). Waves cue distinct behaviors and differentiate transport of congeneric snail larvae from sheltered versus wavy habitats. Proceedings of the National Academy of Sciences Jul 2018, 201804558; DOI: 10.1073/pnas.1804558115

Munroe, D, Haidvogel D, Caracappa, J, Klinck J, Powell E, Hofmann E, Shank B, Hart D. 2018. Modeling larval dispersal and connectivity in the Atlantic sea scallop (Placopecten magellanicus) in the Middle Atlantic Bight. Fisheries Research, 208: 7-15.

Hennen, D., Mann, R., Munroe, D., Powell, E. 2018. Biological reference points for Atlantic surfclam (Spisula solidissima) in warming seas. Fisheries Research, 207: 126-139. https://doi.org/10.1016/j.fishres.2018.06.013

Able, K. W., and T. M. Grothues. 2018. Essential Fish Habitat for nearshore sentinel species of fishes and crabs in heavily urbanized New York Harbor. Urban Naturalist 16:1-25.

Rachel L. Gula and Diane K. Adams. 2018. Effects of Symbiodinium Colonization on Growth and Cell Proliferation in the Giant Clam Hippopus hippopus. The Biological Bulletin 234, no. 2 (April 2018): 130-138. https://doi.org/10.1086/698265

Malin L. Pinsky, Gabriel Reygondeau, Richard Caddell, Juliano Palacios-Abrantes, Jessica Spijkers, William W. L. Cheung. 2018. Preparing ocean governance for species on the move. Science, Vol. 360, Issue 6394, pp. 1189-1191 DOI: 10.1126/science.aat2360

Morson, J., Munroe, D., Ashton-Alcox, K., Powell, E.N., Bushek, D., Gius, J. 2018. Density-dependent capture efficiency of a survey dredge and its influence on the stock assessment of eastern oysters (Crassostrea virginica) in Delaware Bay. Fisheries Research, 205: 115-121.

Rosenthal, Y., Holbourn, A.E., Kulhanek, D.K., and the Expedition 363 Scientists. 2018. Proceedings of the International Ocean Discovery Program Volume 363. Western Pacific Warm Pool. Expedition 363 of the riserless drilling platform. Singapore to Guam. Sites U1482–U1490. https://doi.org/10.14379/iodp.proc.363.2018

Gula, R.L. and D.K. Adams. 2018. Effects of Symbiodinium Colonization on Growth and Cell Proliferation in the Giant Clam Hippopus hippopus. The Biological Bulletin, 234(2):130-138. https://www.journals.uchicago.edu/toc/bbl/current

Able, K. W. and T. M. Grothues. 2018. Essential fish habitat for nearshore sentinel species of fishes and crabs in heavily urbanized New York Harbor. Urban Naturalist. 16:1-25

Morley, J. W., R. L. Selden, R. J. Latour, T. L. Frölicher, R. J. Seagraves, and M. L. Pinsky. 2018. Projecting shifts in thermal habitat for 686 species on the North American continental shelf. PLOS ONE13(5): e0196127 doi: 10.1371/journal.pone.0196127

Pinsky, M. L. 2018. Throwing back the big ones saves a fishery from hot water. Proceedings of the National Academy of Sciences 115(8): 1678-1680 doi: 10.1073/pnas.1722620115

Selden, R. L., R. D. Batt, V. S. Saba, and M. L. Pinsky. 2018. Diversity in thermal affinity among key piscivores buffers impacts of ocean warming on predator-prey interactions. Global Change Biology 24(1): 117-131 doi: 10.1111/gcb.13838

Holtswarth, J. N., S. B. San Jose, H. R. Montes, Jr., J. W. Morley, M. L. Pinsky. 2018. The reproductive seasonality and fecundity of yellowtail clownfish (Amphiprion clarkii) in the Philippines. Bulletin of Marine Science 93(4): 997-1007 doi: 10.5343/bms.2017.1010

Van Wynsberge, S., S. Andréfouët, N. Gaertner-Mazouni, J. Tiavouane, D. Grulois, J. Lefèvre, M. L. Pinsky, and C. Fauvelot. 2018. Considering reefscape configuration and composition in biophysical models advance seascape genetics. PLoS One 12(5): e0178239 doi: 10.1371/journal.pone.0178239

Burgess, B. G., A. Fredston-Hermann, M. L. Pinsky, S. D. Gaines, D. Tilman. 2018. Reply to Le Pape et al.: Management is key to preventing marine extinctions Proceedings of the National Academy of Sciences 114(31): E6275-E6276 doi: 10.1073/pnas.1708147114

Batt, R. D., J. W. Morley, R. L. Selden, M. W. Tingley, and M. L. Pinsky. 2018. Gradual changes in range size accompany long-term trends in species richness. Ecology Letters 20(9): 1148-1157 doi: 10.1111/ele.12812

Fuchs, H.L. and J. A. Specht. 2018. Evidence for diverse responses to viscosity in suspension-feeding bivalves: Reply to Riisgård & Larsen (2018). Marine Ecology Progress Series 596: 267-270

Kohut JT, Winsor P, Statscewich H, Oliver MJ, Fredj E, Couto N, Bernard K, Fraser W. 2018. Variability in summer surface residence time within a West Antarctic Peninsula biological hotspot. Phil. Trans. R. Soc. A 376: 20170165. http://dx.doi.org/10.1098/rsta.2017.0165

Sherrell RM, Annett AL, Fitzsimmons JN, Roccanova VJ, Meredith MP. 2018. A ‘shallow bathtub ring’ of local sedimentary iron input maintains the Palmer Deep biological hotspot on the West Antarctic Peninsula shelf. Phil. Trans. R. Soc. A 376: 20170171.

Hugh W. Ducklow, Michael R. Stukel, Rachel Eveleth, Scott C. Doney, Tim Jickells, Oscar Schofield, Alex R. Baker, John Brindle, Rosie Chance, Nicolas Cassar. 2018. Spring–summer net community production, new production, particle export and related water column biogeochemical processes in the marginal sea ice zone of the Western Antarctic Peninsula 2012–2014. Phil. Trans. R. Soc. A 376: 20170177.

Schofield O, Brown M, Kohut J, Nardelli S, Saba G, Waite N, Ducklow H. 2018. Changes in the upper ocean mixed layer and phytoplankton productivity along the West Antarctic Peninsula. Phil. Trans. R. Soc. A 376: 20170173. http://dx.doi.org/10.1098/rsta.2017.0173

Hyewon Kim, Hugh W. Ducklow, Doris Abele, Eduardo M. Ruiz Barlett, Anita G. J. Buma, Michael P. Meredith, Patrick D. Rozema, Oscar M. Schofield, Hugh J. Venables, Irene R. Schloss. 2018. Inter-decadal variability of phytoplankton biomass along the coastal West Antarctic Peninsula. Phil. Trans. R. Soc. A 376: 20170174. http://dx.doi.org/10.1098/rsta.2017.0174

Jason M. Morson, Daphne M. Munroe, Kathy A. Ashton-Alcox, Eric N. Powell, David Bushek, Jennifer Gius. 2018. Density-dependent capture efficiency of a survey dredge and its influence on the stock assessment of eastern oysters (Crassostrea virginica) in Delaware Bay Science Direct. Pages 115-121.

Schofield, O., Brown, M., Kohut, J., Nardelli, S., Saba, G., Waite, N. Ducklow, H. 2018. Changes in upper ocean mixed layer and phytoplankton productivity along the West Antarctic Peninsula. Philosophical Transactions of the Royal Society. doi 10.1098/rsta.2017.0173

McDonnell, J., deCharon, A., Lichtenwlaner, S. C., Hunter-Thomson, K., Halversen, C., Schofield, O., Glenn, S., Ferraro, C., Lauter, C., Hewlett, J. 2018. Education and public engagement in OOI: Lessons learned from the field. Oceanography 191: 118-126

Schofield, O., Glenn, S., Kohut, J., Miles, T., Roarty, H., Saba, G., McDonnell, J. 2018. Developing practical data skills in undergraduate students using ocean observatories. Marine Technology Society 52(1): 1-7.

Kim, H., Ducklow, H. W., Abele, D., Bartlett, E., Buma, A. G., Meredith, M. P., Rozema, P. D., Schofield, O., Venables, H. J., Schloss, I. R. 2018. Interdecadal variability of the phytoplankton biomass along the coastal West Antarctic Peninsula. Philosophical Transactions of the Royal Society. doi 1098/rsta2017.0049

Ducklow, H. W., Stukel, M. R., Eveleth, R., Doney, S. C., Jickells, T., Schofield, O., Baker, A. R., Brindle, J, Chance, R., Cassar, N. 2018. Spring-summer net community production, new production, particle export and related water column biogeochemical processes in the marginal sea ice zone of the Western Antarctic Peninsula 2012-2014. Philosophical Transactions of the Royal Society doi: 10.1098/rsta.2017.0177

Kennish, M. J. and E. J. Buskey (Eds.). 2018. The National Estuarine Research Reserve: An Integrated Network of Research and Monitoring Sites Supporting Coastal Zone Management. Estuaries and Coasts, Special Thematic Issue, Volume 41(1): 25-113. ISSN:1559-2723.

Meixler, M. S., M. J. Kennish, and K. F. Crowley. 2018. Assessment of plant community characteristics in natural and human-altered coastal marsh ecosystems. Estuaries and Coasts, 41(1): 52-64.

Christien P. Laber, Jonathan E. Hunter, Filipa Carvalho, James R. Collins, Elias J. Hunter, Brittany M. Schieler, Emmanuel Boss, Kuldeep More, Miguel Frada, Kimberlee Thamatrakoln, Christopher M. Brown, Liti Haramaty, Justin Ossolinski, Helen Fredricks, Jozef I. Nissimov, Rebecca Vandzura, Uri Sheyn, Yoav Lehahn, Robert J. Chant, Ana M. Martins, Marco J. L. Coolen, Assaf Vardi, Giacomo R. DiTullio, Benjamin A. S. Van Mooy & Kay D. Bidle (2018). Coccolithovirus facilitation of carbon export in the North Atlantic. Nature Microbiology. doi:10.1038/s41564-018-0128-4. Pdf

A. G. Ramos, V. J. García-Garrido, A. M. Mancho, S. Wiggins, J. Coca, S. Glenn, O. Scho eld, J. Kohut, D. Aragon, J. Kerfoot, T. Haskins, T. Miles, C. Haldeman, N. Strandskov, B. Allsup, C. Jones & J. Shapiro (2018). Lagrangian coherent structure assisted path planning for transoceanic autonomous underwater vehicle missions. Scientific Reports. DOI:10.1038/s41598-018-23028-8. Pdf

Jeffrey B. McQuaid, Adam B. Kustka, Miroslav Oborník, Aleš Horák, John P. McCrow, Bogumil J. Karas, Hong Zheng, Theodor Kindeberg, Andreas J. Andersson, Katherine A. Barbeau & Andrew E. Allen (2018). Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms. Nature. http://dx.doi.org/10.1038/nature25982

St. Pé, A., M. Sperling, J. F. Brodie, and R. Delgado (2018). Classifying rotor-layer wind to reduce offshore available power uncertainty. Wind Energy. http://dx.doi.org/10.1002/we.2159

Veron, D. E., J. F. Brodie, Y. A. Shirazi, and J. R. Gilchrist (2018). Modeling the electrical grid impact of wind ramp-up forecasting error offshore in the Mid-Atlantic region. Journal of Renewable and Sustainable Energy, 10(1):013308. http://dx.doi.org/10.1063/1.4990684

Specht, J. A. and H. L. Fuchs (2018). Thermal and viscous effects of temperature on Mercenaria mercenaria suspension feeding. Mar. Ecol.: Prog. Ser. 589: 133-144. https://doi.org/10.3354/meps12431

Seyler LM, McGuinness LR, Gilbert JA, Biddle JF, Gong D, Kerkhof LJ. 2018. Discerning autotrophy, mixotrophy, and heterotrophy in marine TACK archaea from the North Atlantic. FEMS Microbial. Ecol. doi: 10.1093/femsec/fiy014