DMCS Publications 2000

Weis, J.S., G. Smith and C. Santiago-Bass 2000. Predator/prey interactions: A link between the individual level and both higher and lower level effects of toxicants in aquatic systems. J. Aquat. Ecosyst. Stress & Recovery 7: 145-153.

Zhou, T., H. John-Alder, P. Weis and J.S. Weis 2000. Endocrine disruption: thyroid abnormalities in mummichogs from a polluted environment. Mar. Envir. Res. 50: 393-397.

Burke, D.J., J.S. Weis and P. Weis, 2000. Release of metals by the leaves of the salt marsh grasses Spartina alterniflora and Phragmites australis. Estuar. Coast. Shelf Sci. 51: 153-159.

Phelan, B.A., R. Goldberg, A.J. Bejda, J. Pereira, S. Hagan, P. Clark, A.L. Studholme, A. Calabrese and K.W. Able. 2000. Estuarine and habitat-related differences in growth rates of young-of-the-year winter flounder ( Pseudopleuronectes americanus ) and tautog ( Tautoga onitis ) in three northeastern US estuaries. J. Exp. Mar. Biol. Ecol. 247: 1-28.

Able, K.W. and S. M. Hagan. 2000. Effects of common reed ( Phragmites australis ) invasion on marsh surface macrofauna: response of fishes and decapod crustaceans. Estuaries. 23(5): 633-646.

Able, K.W., D. M. Nemerson, P.R. Light and R.O. Bush. 2000. Initial response of fishes to marsh restoration at a former salt hay farm bordering Delaware Bay. pp. 749-773 In M. P. Weinstein and D. A. Kreeger (eds.), Concepts and Controversies in Tidal Marsh Ecology. Kluwer Academic Publishers, The Netherlands.

Chant, R.J. M.C. Curran, K.W. Able and S.M. Glenn. 2000. Delivery of winter flounder ( Pseudopleuronectes americanus) larvae to settlement habitats in coves near tidal inlets. Estuarine Coastal Shelf Science 51: 529-541.

Sullivan, M.C., R.K. Cowen, K.W. Able and M.P. Fahay. 2000. Spatial scaling of recruitment in four continental shelf fishes. Mar. Ecol. Prog. Ser. 207: 141-154.

Tupper, M. and K.W. Able. 2000. Movements and food habits of striped bass ( Morone saxatilis ) in Delaware Bay (USA) salt marshes: comparison of a restored and a reference marsh. Mar. Biol. 137(5/6): 1049-1058.

National Research Council (NRC). 2000. Improving the collection, management and use of marine fisheries data. Ocean Studies Board, Commision on Geosciences, Environment, and Resources, National Research Counil. Committee: P. Sullivan, K. Able, C. Jones, K.M. Kaye, B. Knuth, B. Norcross, E. Russek-Cohen, J. Sibert, S. Smith, S.K. Thompson, R. Young, J.G. Pope, E.R. Urban Jr., A. Carlisle. National Academy Press, Washington, D.C.

Smith, K.J., G. Taghon and K.W. Able. 2000. Trophic linkages in marshes: ontogenetic changes in diet for young-of-the-year mummichog, Fundulus heteroclitus . pp. 221-237 In M. P. Weinstein and D. A. Kreeger (eds.), Concepts and Controversies in Tidal Marsh Ecology. Kluwer Academic Publishing, The Netherlands.

Wainright, S.C., M.P. Weinstein, K.W. Able and C.A. Currin. 2000. Relative importance of benthic macroalgae, phytoplankton and the detritus of smooth cordgrass ( Spartina ) and the common reed ( Phragmites ) to brackish marsh food webs. Marine Ecology Progress Series. 200: 77-91.

Vivian, D.N. J.T. Duffy-Anderson, R.G. Arndt, and K.W. Able. 2000. Feeding habits of young-of-the-year winter flounder, Pseudopleuronectes americanus , in the Hudson River estuary, U.S.A. Bull. N.J. Acad. Sci. 45(2): 1-6.

Ammerman, J. W., and W. B. Glover. 2000. Continuous underway measurement of microbial ectoenzyme activities in aquatic ecosystems. Marine Ecology Progress Series 201: 1-12

Peek, A.S., B.S. Gaut, R.A. Feldman, J.P. Barry, R.E. Kochevar, R.A. Lutz and R.C. Vrijenhoek. 2000. Neutral and nonneutral mitochondrial genetic variation in deep sea clams from the family Vesicomyidae. J. Molecular Evolution, 50:141-153.

Lutz, R.A., 2000. Deep-sea vents: Science at the Extreme. National Geographic Magazine, 198(4):116-127.

Gebruk, A.V., P. Chevaldonne, T. Shank, R.A. Lutz, and R.C. Vrijenhoek. 2000. Deep-sea hydrothermal vent communities of the Logatchev area (14°45'N, Mid-Atlantic Ridge): diverse biotopes and high biomass. J. Mar. Biol. Assoc. ( U.K. ), 80:383-393.

Pakulski, J. D., Benner, R., Whitledge, T., Amon, R., Eadie, B., Cifuentes, L., Ammerman, J., and Stockwell., D. 2000. Microbial metabolism and nutrient cycling in the Mississippi and Atchafalaya River plumes. Estuarine Coastal And Shelf Science 50: 173-184

Kennish, M. J. 2000. Barnegat Inlet, New Jersey: a case study of anthropogenic impacts. Bulletin of the New Jersey Academy of Science, 45:13-18.

Scala, D. and L. Kerkhof. 2000. Horizontal Heterogeneity in Denitrifying Bacterial Assemblages in Marine Sediments Using TRFLP Analysis. Appl. Environ. Microbiol. 66: 1980-1986

Kerkhof, L., Santoro, M., and J. Garland. 2000. Response of Soybean Rhizosphere Communities to Human Hygiene Water Addition as Determined by Community-Level Physiological Profiling (CLPP) and Terminal Restriction Fragment Length Polymorphism (TRFLP). FEMS Microbiology Letters. 184: 95-101

Bissett, W.P., Schofield, O. , Mobley, C., Crowley, M.F., and Moline, M.A . 2000. In "Methods in Microbiology, Volume 30: Marine Microbiology" (J.H. Paul, ed), Optical Remote Sensing Techniques in Biological Oceanography. Academic Press, London.

Chant, R. J. , C. Curran, K. Able, S. Glenn. 2000. Delivery of Winter Flounder ( Pseudopleuronectes americanus ) Larvae to Settlement Habitats in Coves Near Tidal Inlets. Estuarine and Coastal Shelf Science, 51, 529-541.

Chant, R. J. and R. E. Wilson. 2000. Internal hydraulics and mixing in a highly stratified estuary. Journal of Geophysical Research. 106:14215-14222.

Chassignet, E.P., H.G. Arango, D. Dietrich, T. Ezer, M. Ghil, D.B. Haidvogel C. 2000, DAMEE-NAB: The Base Experiments, Dynamics of Atmospheres and Oceans , 32 : 155-183

Creed, Elizabeth L. and Scott M. Glenn, 2000. Real-time transmission between research vessel and shore command center. OCEANS 2000 MTS/IEEE Conference Proceedings, Providence, RI, Vol. 2, pp. 1153-1157.

Eudeline, B., S.K. Allen, Jr. and X. Guo. 2000. Optimization of tetraploid induction in the Pacific oysters, Crassostrea gigas , using the first polar body as a natural indicator. Aquaculture , 187:73-84.

Eudeline, B., S.K. Allen, Jr. and X. Guo. 2000. Delayed meiosis and polar body release in eggs of triploid Pacific oysters, Crassostrea gigas , in relation to tetraploid production. J. Exp. Mar. Biol. Ecol. , 248:151-161.

Fahnenstiel, G. L., Beckman, C., Lohrenz, S. E., Millie, D. F., Schofield, O. , McCormick, M. J. 2000. Standard Niskin and Van Dorn bottles inhibit phytoplankton photosynthesis in Lake Michigan. Verh. Internat. Verein. Limnol. 27:1836-1840.

Finkel, Z.V . and A. Irwin. 2000. Modelling size-dependent photosynthesis: light absorption and the allometric rule. Journal of Theoretical. Biology, 204: 361-369.

Glenn, S.M ., T.D. Dickey, B. Parker and W. Boicourt, 2000. Long-term real-time coastal ocean observation networks . Oceanography , 13, 24-34.

Glenn, S.M. , W. Boicourt, B. Parker and T.D. Dickey, 2000. Operational observation networks for ports, a large estuary and an open shelf . Oceanography, 13, 12-23.

Glenn, Scott M ., J. Frederick Grassle, and Christopher J. von Alt, 2000. A Well-Sampled Ocean; The Leo Approach. Oceanus, 42 (1), pp. 28-30.

Griffin, D., J. Wilkin, C. Chubb, A. Pearce and N. Caputi (2001), Ocean currents and the larval phase of Australian western rock lobster, Panulirus cygnus, Marine and Freshwater Res. , 52 , 1187-1200.

Kennish, M. J. 2000. Restoration and Maintenance of Estuaries: The National Estuary Program. CRC Press, Boca Raton, Florida, 359 p.

Kirkpatrick, G. , Millie, D. F., Moline, M. A., Schofield, O . 2000. Optical discrimination of a phytoplankton species in natural mixed populations . Limnology and Oceanography 45(2): 467-471.

Levin, Julia G., Mohamed Iskandarani and Dale B. Haidvogel, 2000, A nonconforming spectral element ocean model, International Journal for Numerical Methods in Fluids 34 : 495–525

Malanotte-Rizzoli, P., K. Hedstrom, H.G. Arango, and D.B. Haidvogel, 2000, Water mass pathways between the subtropical and tropical ocean in a climatological simulation of the North Atlantic ocean circulation, Dynamics of Atmospheres and Oceans 32 : 331-371

Munchow, A., and R. J. Chant . 2000. Kinematics of inner shelf motion during the summer stratified season off New Jersey. Journal of Physical Oceanography. 30:247-268 .

Haidvogel, D.B., H.G. Arango, K. Hedstrom, A. Beckmann, P. Malanotte-Rizzoli, and A.F. Shchepetkin, 2000, Model Evaluation Experiments in the North Atlantic Basin: Simulations in Nonlinear Terrain-Following Coordinates, Dynamics of Atmospheres and Oceans 32 : 239-281

S. Tozzi and M. Ribera d'Alcalà, 2000. Primary Production and Remote Sensing. In Remote Sensing and Marine Ecology. Ed. by A. Argentieri, A. Fianchini and L. Rossi, ESA/ESRIN, pp1-19

Styles, R., and S.M. Glenn , 2000. Modeling stratified wave-current bottom boundary layers for the continental shelf. Journal of Geophysical Research, 105, No. C10, 119-124,

Yang, H., F. Zhang and X. Guo. 2000. Triploid and tetraploid zhikong scallop, Chlamys farreri Jones et Preston, produced by inhibiting polar body I. Marine Biotechnology , 2:466-475.

Yang, H., T. Gallivan, X. Guo and S.K. Allen, Jr. 2000. A method for preserving oyster tissue samples for flow cytometry. J. Shellfish Res., 19(2):835-839.

Zhang, Yunqing P., John F. Fracassi, John E. Wiggins, Scott M. Glenn and J. F. Grassle, 2000. RODAN: Rutgers Ocean Data Access Network Powered by Java Technologies . American Meteorological Society: Fifth Symposium on Integrated Observing Systems, pp. 21-25.