Rutgers-led University Consortium Awarded Funding for Atlantic Seaboard Fisheries Research


Led by Rutgers University, a consortium of 14 shellfish geneticists from 12 East Coast universities and government agencies has won a five-year, $4.4 million grant from the Atlantic States Marine Fisheries Commission to develop new tools to accelerate selective breeding to support oyster aquaculture.

Ximing Guo, distinguished professor and renowned shellfish geneticist at Rutgers Haskin Shellfish Research Laboratory, is the lead principal investigator for the project, which will advance the pace of genetic improvement by identifying genes responsible for desirable traits, such as disease tolerance. Improved broodstock will then be made available to commercial hatcheries thereby sustaining the rapidly-expanding $90 million enterprise of farming eastern oysters, Crassostrea virginica, along the East Coast.

The East Coast breeding consortium was formed to support the industry so that hatcheries could provide domesticated lines with desirable traits. For example, over many generations, researchers from Rutgers and the Virginia Institute of Marine Science developed varieties of oysters that are now quite tolerant of MSX, the parasite that essentially wiped out much of the oyster harvest in the mid-Atlantic. Other traits, such as faster growth rate and meatier oysters, have also been substantially improved.

The improvement of traits for the eastern oyster, however, is a regional endeavor. With a native range from Atlantic Canada through the Gulf of Mexico, eastern oysters display clear physiological differences among regions.

“Oysters tend to be adapted to local environmental conditions,” explained Guo. “One goal of our project is to develop genetic strains that are adapted to different regions along the Atlantic Seaboard.”


Shellfish geneticist and distinguished professor Ximing Guo.

According to Guo, several years ago consortium scientists were able to sequence the oyster genome, providing new tools to make direct associations between the genetic code and important traits.

“The team will develop a tool called a “SNP chip” to detect variations across the genome, and through a process called genomic selection, these genetic markers will help identify the best performing oysters,” he added. 

Once the markers associated with economically important traits are identified, breeders along the East Coast will be able to select those broodstock that carry the superior genes.

“While disease resistance is the most important trait for the eastern oyster, we hope to use the same technology to select for other desired traits, such as fast growth and hardiness.”

Other aspects of the project will evaluate the usefulness of genomic selection to address emerging issues, such as resistance to ocean acidification or tolerance to hypoxia, a condition in which oysters are deprived of adequate oxygen supply.

The Eastern Oyster Breeding Consortium comprises 14 research scientists from 12 institutions located along the East Coast from Maine to North Carolina. The team includes the top oyster genetics researchers from Rutgers, the Virginia Institute of Marine Science, the University of Rhode Island, the University of Maryland Center for Environmental Science, Northeastern University Marine Science Center, Stony Brook University, University of Maine, Cornell University, Morgan State University, University of North Carolina at Wilmington, NOAA’s Northeast Fisheries Science Center and the USDA’s Agricultural Research Service. The Consortium is strongly supported industry support from the East Coast Shellfish Growers Association.

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RUCOOL Celebrates the 500th Glider Deployment


This week, RUCOOL deployed the RU30 glider in support of work by Dr. Grace Saba to study ocean pH in the New York Bight. On board the R/V Rutgers for this deployment out of the Sandy Hook area was the Ocean Methods and Data Analysis undergraduate class. Data from this glider and others can be viewed on our Glider Deployment Pages.
RU30 was the 500th glider deployment that Rutgers has supported over the last 18 years. Congrats to Grace, Captain Chip Haldeman and the team on board the R/V Rutgers. We are already looking forward to the 1000th deployment!

Rutgers RIOS Student Deploys an Ocean Glider in the US Virgin Islands


This glider was deployed on the 2nd international mission from the US Virgin Islands and is transiting to the British Virgin Islands in order to study heat flow through the Anegada Straight. Equipped with temperature, salinity, depth and current measuring instruments, this glider will  monitor water transport and heat content in the upper 1000 meters of the ocean. This heat content is important to the formation and fueling of storms such as hurricanes. This collaborative project includes the University of Virgin Islands, Caribbean Wind, Vetlesen Foundation, CARICOOS and Rutgers University.

RU26 In Support of NASA SWOT CALVAL Program


Sea Water Ocean Topography (SWOT) is a radar interferometry mission making SSH measurements over a swath 120 km wide. There is a nadir gap of 20 km where the error from interferometry is not meeting science requirement.  The current candidate for the in-situ measurement is an array of gliders along the center of a swath to resolve the dynamic height at wavelengths of 15-150 km. This will consist of 20 station keeping gliders 7.5 km apart. An OSSE study suggests that a station-keeping glider making vertical loop of the upper 500 m of the water column in 2 hours can meet the requirement of providing quasi-synoptic observations of the dynamic height from the glider array for comparison with the SWOT snapshot measurement of SSH from overflight. The primary objective of the deployment is to test the capability of gliders to retrieve the upper ocean dynamic height time series derived from the M1 mooring covering the upper 300 m of the water column.  The glider was deployed in Monterey Bay and transect 300km west southwest to a set of moorings and maintain a presence inside a pre-defined box. The glider will be deployed for approximately 3 months.

This is a collaborative project with NASA, JPL and with special thanks from Moss Landing Marine Labs and Ian Robbins.