Bibliography
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Papers:
  1. Authors: Arango, H.G., A.M. Moore, A.J. Miller, B.D. Cornuelle, E.Di Lorenzo, and D.J. Neilson
    Date: 2004
    Title: The ROMS Tangent Linear and Adjoint Models: A comprehensive ocean prediction and analysis system
    PDF Link: PDF

  2. Authors: Boyer, D. L., D.B. Haidvogel, N. Pérenne
    Date: 2004
    Title: Laboratory-Numerical Model Comparisons of Canyon Flows: A Parameter Study
    Journal: Journal of Physical Oceanography (JPO)
    Volume: 34    Pages: 1588-1609
    Status: Published
    PDF Link: PDF

  3. Authors: Broquet, Grégoire, Andrew M. Moore, Hernan G. Arango, Christopher A. Edwards and Brian S. Powell
    Date: 2009
    Title: Ocean State and Surface Forcing Correction using the ROMS-IS4DVAR Data Assimilation System
    Journal: Mercator Ocean Quarterly Newsletter
    Pages: 5-13
    Status: Published
    PDF Link: PDF

  4. Authors: Chassignet, E.P., H.G. Arango, D. Dietrich, T. Ezer, M. Ghil, D.B. Haidvogel C.-C. Ma, A. Mehra, A.M. Paiva, Z. Sirkes
    Date: 2000
    Title: DAMEE-NAB: The Base Experiments
    Journal: Dynamics of Atmospheres and Oceans
    Volume: 32    Pages: 155-183
    Status: Published
    PDF Link: PDF

  5. Authors: Choi, B-J, M. Iskandarani, J. Levin and D.B. Haidvogel
    Date: 2004
    Title: A spectral finite volume method for the shallow water equations
    Journal: Monthly Weather Review (MWR)
    Volume: 132    Pages: 1777-1791
    Status: Published
    PDF Link: PDF

  6. Authors: Choi, B-J, D. B. Haidvogel, Y. Cho
    Date: 2004
    Title: Nonseasonal sea level variations in the Japan/East Sea from satellite altimeter data
    Journal: Journal of Geophysical Research
    Volume: 109    Status: Published
    PDF Link: PDF

  7. Authors: Di Lorenzo, E., N. Schneider, K. M. Cobb, P. J. S. Franks, K. Chhak, A. J. Miller, J. C. McWilliams, S. J. Bograd, H. Arango, E. Curchitser, T. M. Powell, and P. Rivière
    Date: 2008
    Title: North Pacific Gyre Oscillation links ocean climate and ecosystem change
    Journal: Geophysical Research Letters
    Volume: 35    Pages: L08607
    Status: Published
    PDF Link: PDF

  8. Authors: Di Lorenzo, Emanuele, Andrew M. Moore, Hernan G. Arango, Bruce D. Cornuelle, Arthur J. Miller, Brian Powell, Boon S. Chua, Andrew F. Bennett
    Date: 2007
    Title: Weak and strong constraint data assimilation in the inverse Regional Ocean Modeling System (ROMS): Development and application for a baroclinic coastal upwelling system
    Journal: Ocean Modelling
    Volume: 16    Pages: 160-187
    Status: Published
    PDF Link: PDF

  9. Authors: Durski, S.M., S.M. Glenn, D.B. Haidvogel
    Date: 2004
    Title: Vertical mixing schemes in the coastal ocean: Comparison of the Level 2.5 Mellor-Yamada scheme with an enhanced version of the K-profile parameterization
    Journal: Journal of Geophysical Research
    Volume: 109    Pages: C01015
    Status: Published
    PDF Link: PDF

  10. Authors: Ezer, T., H.G. Arango and A.F. Shchepetkin
    Date: 2002
    Title: Developments in terrain-following ocean models: intercomparisons of numerical aspects
    Journal: Ocean Modelling
    Volume: 4    Pages: 249-267
    Status: Published
    PDF Link: PDF

  11. Authors: Fennel, K., J. Wilkin, J. Levin, J. Moisan, J. O'Reilly, and D. Haidvogel
    Date: 2006
    Title: Nitrogen cycling in the Middle Atlantic Bight: Results from a three-dimensional model and implications for the North Atlantic nitrogen budget
    Journal: Global Biogeochemical Cycles
    Volume: 20    Pages: GB3007
    Status: Published
    PDF Link: PDF

  12. Authors: Fennel, K., J. Wilkin, M. Previdi, R. Najjar
    Date: 2008
    Title: Denitrification effects on air-sea CO2 flux in the coastal ocean: Simulations for the Northwest North Atlantic
    Journal: Geophysical Research Letters
    Volume: 35    Pages: L24608
    Status: Published
    PDF Link: PDF

  13. Authors: Fiechter, J., A.M. Moore, C.A. Edwards, K.W. Bruland, E. Di Lorenzo, C.V.W. Lewis, T.M. Powell, E. Curchitser, and K. Hedstrom
    Date: 2009
    Title: Modeling iron limitation of primary production in the coastal Gulf of Alaska
    Journal: Deep-Sea Research Part II: Topical Studies in Oceanography
    Volume: 56    Pages: 2503-2519
    Status: Published
    PDF Link: PDF

  14. Authors: Haidvogel, D.B.
    Date: April 4, 2003
    Title: Cross-shelf Exchange Driven by Oscillatory Barotropic Currents Over an Isolated Costal Canyon: Equilibrium Circulation and Dynamics
    Journal: Journal of Physical Oceanography (JPO)
    Status: Submitted
    PDF Link: PDF

  15. Authors: Haidvogel, D.B. and A. Beckmann
    Date: 1999
    Title: Numerical Ocean Circulation Modeling
    Journal: Numerical Ocean Circulation Modeling
    Pages: 318 pp.
    Status: Published

  16. Authors: Haidvogel, D.B., H. Arango, W.P. Budgell, B.D. Cornuelle, E. Curchitser, E. Di Lorenzo, K. Fennel, W.R. Geyer, A.J. Hermann, L. Lanerolle, J. Levin, J.C. McWilliams, A.J. Miller, A.M. Moore, T.M. Powell, A.F. Shchepetkin, C.R. Sherwood, R.P. Signell, J.C. Warner, J. Wilkin
    Date: 2008
    Title: Ocean forecasting in terrain-following coordinates: Formulation and skill assessment of the Regional Ocean Modeling System
    Journal: Journal of Computational Physics
    Volume: 227    Pages: 3595-3624
    Status: Published
    PDF Link: PDF

  17. Authors: Haidvogel, D.B., H.G. Arango, K. Hedstrom, A. Beckmann, P. Malanotte-Rizzoli, and A.F. Shchepetkin
    Date: 2000
    Title: Model Evaluation Experiments in the North Atlantic Basin: Simulations in Nonlinear Terrain-Following Coordinates
    Journal: Dynamics of Atmospheres and Oceans
    Volume: 32    Pages: 239-281
    Status: Published
    PDF Link: PDF

  18. Authors: Han, W., A.M. Moore, J. Levin, B. Zhang, H.G. Arango, E. Curchitser, E. Di Lorenzo, A.L. Gordon, J. Lin
    Date: 2009
    Title: Seasonal surface ocean circulation and dynamics in the Philippine Archipelago region during 2004–2008
    Journal: Dynamics of Atmospheres and Oceans
    Volume: 47    Pages: 114-137
    Status: Published
    PDF Link: PDF

  19. Authors: Hermann, A. J., E. N. Curchitser, D. B. Haidvogel and E. L. Dobbins
    Date: 2009
    Title: A comparison of remote versus local influence of El Nino on the coastal circulation of the Northeast Pacific
    Journal: Deep-Sea Research Part II: Topical Studies in Oceanography
    Volume: 56    Pages: 2427-2443
    Status: Published
    PDF Link: PDF

  20. Authors: Hermann, A.J., S. Hinckley, E. L. Dobbins, D. B. Haidvogel, N. A. Bond, C. Mordy, N. Kachel and P. J. Stabeno
    Date: 2009
    Title: Quantifying cross-shelf and vertical nutrient flux in the Gulf of Alaska with a spatially nested, coupled biophysical model
    Journal: Deep-Sea Research Part II: Topical Studies in Oceanography
    Volume: 56    Pages: 2474-2486
    Status: Published
    PDF Link: PDF

  21. Authors: Iskandarani, M., D. Haidvogel, J. Levin, E. Curchitser, C. Edwards
    Date: October, 2002
    Title: Multi-Scale Geophysical Modeling Using the Spectral Element Method
    Journal: Computing in Science and Engineering
    Volume: 4    Pages: 42-48
    Status: Published
    PDF Link: PDF

  22. Authors: Iskandarani, M., D. Haidvogel, and J. Levin
    Date: 2003
    Title: A three-dimentional spectral element model for the solution of the hydrostatic primitive equations
    Journal: Journal of Computational Physics
    Volume: 186    Pages: 397-425
    Status: Published
    PDF Link: PDF

  23. Authors: Iskandarani, M., J. Levin, B-J Choi, D.B. Haidvogel
    Date: 2005
    Title: Comparison of Advection Schemes for high order h-p Finite Element and Finite Volume Methods
    Journal: Ocean Modelling
    Volume: 10    Pages: 233-252
    Status: Published
    PDF Link: PDF

  24. Authors: Le Matre, Olivier, Julia Levin, Mohamed Iskandarani and Omar M. Knio
    Date: 2001
    Title: A Multiscale Pressure Splitting of the Shallow-Water Equations
    Journal: Journal of Computational Physics
    Volume: 166    Pages: 116–151
    Status: Published
    PDF Link: PDF

  25. Authors: Levin, Julia G., Mohamed Iskandarani and Dale B. Haidvogel
    Date: 2000
    Title: A nonconforming spectral element ocean model
    Journal: International Journal for Numerical Methods in Fluids
    Volume: 34    Pages: 495–525
    Status: Published
    PDF Link: PDF

  26. Authors: Levin, Julia G., Mohamed Iskandarani, and Dale B. Haidvogel
    Date: 1997
    Title: A Spectral Filtering Procedure for Eddy-Resolving Simulations with a Spectral Element Ocean Model
    Journal: Journal of Computational Physics
    Volume: 137    Pages: 130–154
    Status: Published
    PDF Link: PDF

  27. Authors: Malanotte-Rizzoli, P., K. Hedstrom, H.G. Arango, and D.B. Haidvogel,
    Date: 2000
    Title: Water mass pathways between the subtropical and tropical ocean in a climatological simulation of the North Atlantic ocean circulation
    Journal: Dynamics of Atmospheres and Oceans
    Volume: 32    Pages: 331-371
    Status: Published
    PDF Link: PDF

  28. Authors: Miller, Arthur J., Douglas J. Neilson, Douglas S. Luther, Myrl C. Hendershott, Bruce D. Cornuelle, Peter F. Worcester, Matthew A. Dzieciuch, Brian D. Dushaw, Bruce M. Howe, Julia C. Levin, Hernan G. Arango, and Dale B. Haidvogel
    Date: 2007
    Title: Barotropic Rossby wave radiation from a model Gulf Stream
    Journal: Geophysical Research Letters
    Volume: 34    Pages: L23613
    Status: Published
    PDF Link: PDF

  29. Authors: Moore, A.M., H.G. Arango, A.J. Miller, B.D. Cornuelle, E. Di Lorenzo and D.J. Neilson
    Date: 2004
    Title: A Comprehensive Ocean Prediction and Analysis System Based on the Tangent Linear and Adjoint Components of a Regional Ocean Model
    Journal: Ocean Modelling
    Volume: 7    Pages: 227-258
    Status: Published
    PDF Link: PDF

  30. Authors: Moore, A.M., H.G. Arango, E. Di Lorenzo, A.J. Miller, and B.D. Cornuelle
    Date: 2009
    Title: An Adjoint Sensitivity Analysis of the Southern California Current Circulation and Ecosystem
    Journal: Journal of Physical Oceanography (JPO)
    Volume: 39    Pages: 702–720
    Status: Published
    PDF Link: PDF

  31. Authors: Moore, A.M., H.G. Arango, G. Broquet, B.S. Powell, A.T. Weaver, and J. Zavala-Garay
    Date: 2011
    Title: The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilations systems, Part I - System overview and formulation
    Journal: Progress in Oceanography
    Volume: 91    Pages: 34-49
    Status: Published
    PDF Link: PDF

  32. Authors: Moore, A.M., H.G. Arango, G. Broquet, C. Edward, M. Veneziani, B. Powell, D. Foley, J.D. Doyle, D. Costa, and P. Robinson
    Date: 2011
    Title: The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilations systems, Part II – Performance and application to the California Current System
    Journal: Progress in Oceanography
    Volume: 91    Pages: 50-73
    Status: Published
    PDF Link: PDF

  33. Authors: Moore, A.M., H.G. Arango, G. Broquet, C. Edward, M. Veneziani, B. Powell, D. Foley, J.D. Doyle, D. Costa, and P. Robinson
    Date: 2011
    Title: The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilations systems, Part III - Observation impact and observation sensitivity in the California Current
    Journal: Progress in Oceanography
    Volume: 91    Pages: 74-94
    Status: Published
    PDF Link: PDF

  34. Authors: Peliz, A., J. Dubert, D. B. Haidvogel
    Date: 2003
    Title: Subinertial Response of a Density-Driven Eastern Boundary Poleward Current to Wind Forcing
    Journal: Journal of Physical Oceanography (JPO)
    Volume: 33    Pages: 1633-1650
    Status: Published
    PDF Link: PDF

  35. Authors: Peliz, A., J. Dubert, D.B. Haidvogel, and B. Le Cann
    Date: 2003
    Title: Generation and unstable evolution of a density-driven Eastern Poleward Current: The Iberian Poleward Current
    Journal: Journal of Geophysical Research
    Volume: 108    Pages: 3268
    Status: Published
    PDF Link: PDF

  36. Authors: Powell, B.S., A.M. Moore, H.G. Arango, E. Di Lorenzo, R.F. Milliff, R.R. Leben
    Date: 2009
    Title: Near real-time ocean circulation assimilation and prediction in the Intra-Americas Sea with ROMS
    Journal: Dynamics of Atmospheres and Oceans
    Volume: 48    Pages: 46-68
    Status: Published
    PDF Link: PDF

  37. Authors: Powell, B.S., H.G. Arango, A.M. Moore, E. Di Lorenzo, R.F. Milliff, D. Foley
    Date: 2008
    Title: 4DVAR data assimilation in the Intra-Americas Sea with the Regional Ocean Modeling System (ROMS)
    Journal: Ocean Modelling
    Volume: 25    Pages: 173-188
    Status: Published
    PDF Link: PDF

  38. Authors: Song, Y.T. and D.B. Haidvogel
    Date: 1994
    Title: A semi-implicit ocean circulation model using a generalized topography-following coordinate system
    Journal: Journal of Computational Physics
    Volume: 115    Pages: 228-244
    Status: Published
    PDF Link: PDF

  39. Authors: Styles, R. and S.M. Glenn
    Date: 2000
    Title: Modeling stratified wave and current bottom boundary layers in the continental shelf
    Journal: Journal of Geophysical Research
    Volume: 105    Pages: 24119-24139
    Status: Published
    PDF Link: PDF

  40. Authors: Syamsudin, F., A. Kaneko, D. B. Haidvogel
    Date: 2004
    Title: Numerical and observational estimates of Indian Ocean Kelvin wave intrusion into Lombok Strait
    Journal: Geophysical Research Letters
    Volume: 31    Pages: L24307
    Status: Published
    PDF Link: PDF

  41. Authors: Warner, John C., Christopher R. Sherwood, Hernan G. Arango, Richard P. Signell
    Date: 2005
    Title: Performance of Four Turbulence Closure Methods Implemented Using a Generic Length Scale Method
    Journal: Ocean Modelling
    Volume: 8    Pages: 81-113
    Status: Published
    PDF Link: PDF

  42. Authors: Warner, John C., Christopher R. Sherwood, Richard P. Signell, Courtney K. Harris, Hernan G. Arango
    Date: 2008
    Title: Development of a three-dimensional, regional, coupled wave, current, and sediment-transport model
    Journal: Computers & Geoscience
    Volume: 34    Pages: 1284-1306
    Status: Published
    PDF Link: PDF

  43. Authors: Wilkin, J.L, H.G. Arango, D.B. Haidvogel, C.S. Lichtenwalner, S.M. Glenn, and K.S. Hedstrom
    Date: 2005
    Title: A Regional Ocean Modeling System for the Long-term Ecosystem Laboratory
    Journal: Journal of Geophysical Research
    Volume: 110    Pages: C06S91
    Status: Published
    PDF Link: PDF

  44. Authors: Zhang, W.G., J.L. Wilkin, J.C. Levin, And H.G. Arango
    Date: 2009
    Title: An Adjoint Sensitivity Study of Buoyancy- and Wind-Driven Circulation on the New Jersey Inner Shelf
    Journal: Journal of Physical Oceanography (JPO)
    Volume: 39    Pages: 1652–1668
    Status: Published
    PDF Link: PDF





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